Click here to switch to the map view.

The map label for this gene is ydjH [C]

Identifier: 110678309

GI number: 110678309

Start: 927505

End: 928491

Strand: Reverse

Name: ydjH [C]

Synonym: RD1_0962

Alternate gene names: 110678309

Gene position: 928491-927505 (Counterclockwise)

Preceding gene: 110678310

Following gene: 110678308

Centisome position: 22.46

GC content: 58.46

Gene sequence:

>987_bases
ATGACACAATACGAAGTGGTCGGCATCGGAAACGCCGTTGTCGACGTGATCAGCCATGCCGATGACAGTTTTCTCGCCCA
TATGGGCATCGAAAAAGGCATCATGCAGCTGATCGAACGCGACCGGGCCGAGGTGCTTTATGGCGCGATGCAGGATCGCC
TGCAAACACCGGGCGGCTCGGTTGCCAATGCCATTGCAGGTGTCGGCGCTCTGGGCTTGCCGACAGCCTTTATCGGGCGG
GTGCACGACGATGCTTTGGGCCGGTTTTATGCAGAATCCATGCGCGATGGTGGCACCGATTTCGTGAATGCGCCGGTGCA
GGGTGGGGATTTGCCAACCTCACGTTCCATGATTTTCGTCTCCCCCGATGGTGAGCGGTCGATGAACACATACCTTGGTA
TTTCAACGGACCTTGGCCCGGCGGACGTGCCCGAAACAGTCGCATCCAATGCCAAGATCATCTTTCTTGAGGGGTATTTG
TTTGACAAGGACCACGGCAAAGAGGCGTTTTTGCAAGCCTCCCGTCTGGCTTGTGCGGCAGGTGGTAAAGCAGGGATCGC
CATCTCCGACCCCTTTTGTGTCGAGCGGCACCGCTCTGATTTCCTGACCCTGATCGAGAACGAACTGGATTACGTGATCG
GCAATCAGCACGAGATTGAATCGCTCTTTGAAACCGATCTTGAAACCGCGCTCGCGAAAACGGCGGCGATCTGCCCCCTG
GTGATATGCACGCGATCAGGCGATGGCGTCACCGTGGTTTCAGGGGATGAACGCATTGATGTCCCCGTGCAGACGGTCAC
ACCCGTGGACGCAACCGGGGCGGGCGATCAATTCGCCGCCGGGTTCCTCTATGGCATGGCAACGGGGCGCGATCTGACGA
CCTGCGCGCGGATGGGCAATCTTTGCGCAGCCGAAGTCATAAGCCACGTTGGCCCCCGGCCCCTGATCGACATGATGGCG
GAATTCCGTAAGGCGGGACTGGTCTGA

Upstream 100 bases:

>100_bases
ATTGGATGATCCTGCATGGGCGCTACCACTGCAAAGCGCGCAAGCCCCTGTGCGGGACCTGCATCATAAACGATCTCTGC
CCATTTGAGGACAAAACCGA

Downstream 100 bases:

>100_bases
CAATGCTCGGCAATGGCTTCCACGGCATTCCCGCAGGCAAACTGGCGATGATCGTCACCTATCTGGAAATGCGCGAACGC
GCGGCGGTAACACCCCGCCC

Product: PfkB family kinase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTQYEVVGIGNAVVDVISHADDSFLAHMGIEKGIMQLIERDRAEVLYGAMQDRLQTPGGSVANAIAGVGALGLPTAFIGR
VHDDALGRFYAESMRDGGTDFVNAPVQGGDLPTSRSMIFVSPDGERSMNTYLGISTDLGPADVPETVASNAKIIFLEGYL
FDKDHGKEAFLQASRLACAAGGKAGIAISDPFCVERHRSDFLTLIENELDYVIGNQHEIESLFETDLETALAKTAAICPL
VICTRSGDGVTVVSGDERIDVPVQTVTPVDATGAGDQFAAGFLYGMATGRDLTTCARMGNLCAAEVISHVGPRPLIDMMA
EFRKAGLV

Sequences:

>Translated_328_residues
MTQYEVVGIGNAVVDVISHADDSFLAHMGIEKGIMQLIERDRAEVLYGAMQDRLQTPGGSVANAIAGVGALGLPTAFIGR
VHDDALGRFYAESMRDGGTDFVNAPVQGGDLPTSRSMIFVSPDGERSMNTYLGISTDLGPADVPETVASNAKIIFLEGYL
FDKDHGKEAFLQASRLACAAGGKAGIAISDPFCVERHRSDFLTLIENELDYVIGNQHEIESLFETDLETALAKTAAICPL
VICTRSGDGVTVVSGDERIDVPVQTVTPVDATGAGDQFAAGFLYGMATGRDLTTCARMGNLCAAEVISHVGPRPLIDMMA
EFRKAGLV
>Mature_327_residues
TQYEVVGIGNAVVDVISHADDSFLAHMGIEKGIMQLIERDRAEVLYGAMQDRLQTPGGSVANAIAGVGALGLPTAFIGRV
HDDALGRFYAESMRDGGTDFVNAPVQGGDLPTSRSMIFVSPDGERSMNTYLGISTDLGPADVPETVASNAKIIFLEGYLF
DKDHGKEAFLQASRLACAAGGKAGIAISDPFCVERHRSDFLTLIENELDYVIGNQHEIESLFETDLETALAKTAAICPLV
ICTRSGDGVTVVSGDERIDVPVQTVTPVDATGAGDQFAAGFLYGMATGRDLTTCARMGNLCAAEVISHVGPRPLIDMMAE
FRKAGLV

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=339, Percent_Identity=27.7286135693215, Blast_Score=76, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17541820, Length=334, Percent_Identity=23.9520958083832, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21355521, Length=348, Percent_Identity=23.2758620689655, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 34751; Mature: 34620

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQYEVVGIGNAVVDVISHADDSFLAHMGIEKGIMQLIERDRAEVLYGAMQDRLQTPGGS
CCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VANAIAGVGALGLPTAFIGRVHDDALGRFYAESMRDGGTDFVNAPVQGGDLPTSRSMIFV
HHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEE
SPDGERSMNTYLGISTDLGPADVPETVASNAKIIFLEGYLFDKDHGKEAFLQASRLACAA
CCCCCCCCHHEEEEECCCCCCCCCHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHC
GGKAGIAISDPFCVERHRSDFLTLIENELDYVIGNQHEIESLFETDLETALAKTAAICPL
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEE
VICTRSGDGVTVVSGDERIDVPVQTVTPVDATGAGDQFAAGFLYGMATGRDLTTCARMGN
EEEECCCCCEEEEECCCEECCCEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCC
LCAAEVISHVGPRPLIDMMAEFRKAGLV
HHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQYEVVGIGNAVVDVISHADDSFLAHMGIEKGIMQLIERDRAEVLYGAMQDRLQTPGGS
CCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VANAIAGVGALGLPTAFIGRVHDDALGRFYAESMRDGGTDFVNAPVQGGDLPTSRSMIFV
HHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEE
SPDGERSMNTYLGISTDLGPADVPETVASNAKIIFLEGYLFDKDHGKEAFLQASRLACAA
CCCCCCCCHHEEEEECCCCCCCCCHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHC
GGKAGIAISDPFCVERHRSDFLTLIENELDYVIGNQHEIESLFETDLETALAKTAAICPL
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEE
VICTRSGDGVTVVSGDERIDVPVQTVTPVDATGAGDQFAAGFLYGMATGRDLTTCARMGN
EEEECCCCCEEEEECCCEECCCEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCC
LCAAEVISHVGPRPLIDMMAEFRKAGLV
HHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]