| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
Click here to switch to the map view.
The map label for this gene is 110678305
Identifier: 110678305
GI number: 110678305
Start: 926195
End: 926371
Strand: Direct
Name: 110678305
Synonym: RD1_0958
Alternate gene names: NA
Gene position: 926195-926371 (Clockwise)
Preceding gene: 110678303
Following gene: 110678307
Centisome position: 22.41
GC content: 55.93
Gene sequence:
>177_bases TTGGATAGTTGGCCATTCGAAACCCTCCCCGGTCATTATTGTCGTGACATGGCATTATCCGGCAAAGCCTGTCACGCGCA ACGCCGCGTCACAATCGCAAATGCGCATGCCGGGATGTTCCTCGTCCCCTTTGGCCCGACCGGGCTTTTGTGCGATGGGT TTTTTGCGTATGCCTGA
Upstream 100 bases:
>100_bases CGGTTCCAGTCCTTGGTTTCTTCAAGGCCAGTGTGCATCGACCCCATCAACACGCGGTTTTTCAGCGTCGTAAAGCCAAG ATCCAGCGGCGCCAGTAGAT
Downstream 100 bases:
>100_bases CAAATCATTAAGCACACGAAAAAACAAAATGCGACCCAGCGGAAAAGGACCCGTCATGACCCCAGAAGAGATCGCCAGAC TGCCCTATCGTCCTTGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 58
Protein sequence:
>58_residues MDSWPFETLPGHYCRDMALSGKACHAQRRVTIANAHAGMFLVPFGPTGLLCDGFFAYA
Sequences:
>Translated_58_residues MDSWPFETLPGHYCRDMALSGKACHAQRRVTIANAHAGMFLVPFGPTGLLCDGFFAYA >Mature_58_residues MDSWPFETLPGHYCRDMALSGKACHAQRRVTIANAHAGMFLVPFGPTGLLCDGFFAYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6348; Mature: 6348
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSWPFETLPGHYCRDMALSGKACHAQRRVTIANAHAGMFLVPFGPTGLLCDGFFAYA CCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEECCEEECC >Mature Secondary Structure MDSWPFETLPGHYCRDMALSGKACHAQRRVTIANAHAGMFLVPFGPTGLLCDGFFAYA CCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA