Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110678303

Identifier: 110678303

GI number: 110678303

Start: 923735

End: 924178

Strand: Direct

Name: 110678303

Synonym: RD1_0956

Alternate gene names: NA

Gene position: 923735-924178 (Clockwise)

Preceding gene: 110678301

Following gene: 110678305

Centisome position: 22.35

GC content: 56.76

Gene sequence:

>444_bases
ATGAGACGTATTGCAGGCTTCATCGCGGCATTTGTTCTGACCGCGTCATTTGCGTGGGCTGGCGGCGAAACCCCCGCGAA
CCCGGATGCCGAAGTGTATTTTATCAACCTTGAAGACGGCCAAACCGTATCTTCGCCCGTGCGGGTAAAGTTCGGTTTGC
GCGGGATGGGCGTCGCCCCGGCGGGCACGGAAAAAGAGATGACGGGGCATCATCACCTGTTCGTTAACCGTGCGCCGTTT
GGTGAGGGCGAAGACGGTGCTGACGAGTTGGCAAATGGTATTCCGGCTGATGAAAACCACATCCATTTCGGTGGTGGTCA
GACCGAAACGGAAATCGAGTTGCCCGCTGGTCAGCACACGCTCCAGCTTGTTTTGGGAGACTCGGGGCATGTACCACATG
CAACGCCCATCGTGTCCGAGGTAATTACCATTACCGTCGAGTGA

Upstream 100 bases:

>100_bases
AAGCTACACGATGTGTTGACCAACCGATCCGCCCGGATCGCTGGACGAGTGAACGCCTCAGGCTATCGTTTAAGGTCACA
ATCAAAGGGAGGATTATGAA

Downstream 100 bases:

>100_bases
GTTTCTAAAGTACTGCCGCCAAACGCGTGCCCTGATCAATTGCGCGTTTGGCATCCAGTTCTGCGGCCACATCTGCACCG
CCGATGATGTGATAGGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRRIAGFIAAFVLTASFAWAGGETPANPDAEVYFINLEDGQTVSSPVRVKFGLRGMGVAPAGTEKEMTGHHHLFVNRAPF
GEGEDGADELANGIPADENHIHFGGGQTETEIELPAGQHTLQLVLGDSGHVPHATPIVSEVITITVE

Sequences:

>Translated_147_residues
MRRIAGFIAAFVLTASFAWAGGETPANPDAEVYFINLEDGQTVSSPVRVKFGLRGMGVAPAGTEKEMTGHHHLFVNRAPF
GEGEDGADELANGIPADENHIHFGGGQTETEIELPAGQHTLQLVLGDSGHVPHATPIVSEVITITVE
>Mature_147_residues
MRRIAGFIAAFVLTASFAWAGGETPANPDAEVYFINLEDGQTVSSPVRVKFGLRGMGVAPAGTEKEMTGHHHLFVNRAPF
GEGEDGADELANGIPADENHIHFGGGQTETEIELPAGQHTLQLVLGDSGHVPHATPIVSEVITITVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15523; Mature: 15523

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIAGFIAAFVLTASFAWAGGETPANPDAEVYFINLEDGQTVSSPVRVKFGLRGMGVAP
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCC
AGTEKEMTGHHHLFVNRAPFGEGEDGADELANGIPADENHIHFGGGQTETEIELPAGQHT
CCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCEEEECCCCCEE
LQLVLGDSGHVPHATPIVSEVITITVE
EEEEECCCCCCCCCCHHCEEEEEEEEC
>Mature Secondary Structure
MRRIAGFIAAFVLTASFAWAGGETPANPDAEVYFINLEDGQTVSSPVRVKFGLRGMGVAP
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCC
AGTEKEMTGHHHLFVNRAPFGEGEDGADELANGIPADENHIHFGGGQTETEIELPAGQHT
CCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCEEEECCCCCEE
LQLVLGDSGHVPHATPIVSEVITITVE
EEEEECCCCCCCCCCHHCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA