Click here to switch to the map view.

The map label for this gene is 110678224

Identifier: 110678224

GI number: 110678224

Start: 853202

End: 853792

Strand: Direct

Name: 110678224

Synonym: RD1_0877

Alternate gene names: NA

Gene position: 853202-853792 (Clockwise)

Preceding gene: 110678223

Following gene: 110678225

Centisome position: 20.64

GC content: 64.13

Gene sequence:

>591_bases
ATGGCGGCAGGGATGCCGGGGCTGGCGGCCGGTTTTTTCGATGATCCCGAATGGCAGGGTGCAGCCCTCTACCGGGCGGG
GGATTACGATGCGGCGGCAGATCGCTTTGCGCAGGCATCGGCCCTGTTCAACCTCGGCAATGCCGAGGCGCATCGCGGCA
ATCACGCAGCCGCTCTCGAAGCATTCGACATGGCGCATGCGCGTGGACATCCGGATGCTTTGGCAAATTTCGACGTGGTG
GCGGCCTATTTTGCGGGGCTCGGCATAGGCCCTGAAATGCTCGCGCTGTTTGGCAAGCGCAAGGATGGACCCACAGCCGA
GAGTTTCGTGGCGCGCGGGGATGCGCGCGCTGCCGGCACCGGTAGTGAGGTGACCAACAACAACACCATGCTGGGCCTGA
CGGAGCTGGAAAGCCGCGGGCAACTTGGCGTGCGCCGTGTTTTTGATGATAAATTCATGCGGGCCGATGCGCGCTGGCTC
AAGCAGCTATCGGATGTGCCGGGGGAATATCTGGCCGCGCGGATCGCGATGGAACACAAACGGCGCGTCAAGCTGGGCCT
GTCGCCCGCCGCGCCGGAGGATCCGCGATGA

Upstream 100 bases:

>100_bases
TTCGCAGGCAGGTCGCATGAGGGTGCTTGCGCTCCTCACGGTCGCGGCGGTTGCGCTTGCGCTGCTGCTTGGGGGGGCGG
CCCCTTTCGGGCGCGTGTTG

Downstream 100 bases:

>100_bases
GGTGGCTGTTGTGGATCATCCTCACCCTTTGCCCGGCGGCCCTGCACGCGCAGTCCAAAACTGTGCTGCCGCATGAACTG
GTCCTGAGCATCGAGGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MAAGMPGLAAGFFDDPEWQGAALYRAGDYDAAADRFAQASALFNLGNAEAHRGNHAAALEAFDMAHARGHPDALANFDVV
AAYFAGLGIGPEMLALFGKRKDGPTAESFVARGDARAAGTGSEVTNNNTMLGLTELESRGQLGVRRVFDDKFMRADARWL
KQLSDVPGEYLAARIAMEHKRRVKLGLSPAAPEDPR

Sequences:

>Translated_196_residues
MAAGMPGLAAGFFDDPEWQGAALYRAGDYDAAADRFAQASALFNLGNAEAHRGNHAAALEAFDMAHARGHPDALANFDVV
AAYFAGLGIGPEMLALFGKRKDGPTAESFVARGDARAAGTGSEVTNNNTMLGLTELESRGQLGVRRVFDDKFMRADARWL
KQLSDVPGEYLAARIAMEHKRRVKLGLSPAAPEDPR
>Mature_195_residues
AAGMPGLAAGFFDDPEWQGAALYRAGDYDAAADRFAQASALFNLGNAEAHRGNHAAALEAFDMAHARGHPDALANFDVVA
AYFAGLGIGPEMLALFGKRKDGPTAESFVARGDARAAGTGSEVTNNNTMLGLTELESRGQLGVRRVFDDKFMRADARWLK
QLSDVPGEYLAARIAMEHKRRVKLGLSPAAPEDPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20921; Mature: 20789

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAGMPGLAAGFFDDPEWQGAALYRAGDYDAAADRFAQASALFNLGNAEAHRGNHAAALE
CCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
AFDMAHARGHPDALANFDVVAAYFAGLGIGPEMLALFGKRKDGPTAESFVARGDARAAGT
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC
GSEVTNNNTMLGLTELESRGQLGVRRVFDDKFMRADARWLKQLSDVPGEYLAARIAMEHK
CCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RRVKLGLSPAAPEDPR
HHHEECCCCCCCCCCC
>Mature Secondary Structure 
AAGMPGLAAGFFDDPEWQGAALYRAGDYDAAADRFAQASALFNLGNAEAHRGNHAAALE
CCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
AFDMAHARGHPDALANFDVVAAYFAGLGIGPEMLALFGKRKDGPTAESFVARGDARAAGT
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC
GSEVTNNNTMLGLTELESRGQLGVRRVFDDKFMRADARWLKQLSDVPGEYLAARIAMEHK
CCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RRVKLGLSPAAPEDPR
HHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA