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The map label for this gene is 110678223

Identifier: 110678223

GI number: 110678223

Start: 852222

End: 853121

Strand: Direct

Name: 110678223

Synonym: RD1_0876

Alternate gene names: NA

Gene position: 852222-853121 (Clockwise)

Preceding gene: 110678222

Following gene: 110678224

Centisome position: 20.62

GC content: 64.78

Gene sequence:

>900_bases
ATGAGCGACCTTGCGCTGACCCTGCTACGCCCCTGGTGGCTTCTGGGGCTGCCTGTCTTGATCGGCGTCGGCTGGTGGAT
GTATACGCGGCGCGGCGGGCTGGGTGATTGGCAAAAGGCGACTGATCCGGCACTGCTGCGGGCCATGATGGCGCTGGACC
GGGTGGACAACAGCGCCAGCCGCGCGCCGCTTCTGGCGATGCTGTCCGCGGTTGGTGTGACGCTGCTGGCGCTGTCCGGA
CCGGCGGTGGAACGGCGCGACGCGCTGTCCTTTCGCAATCTTGATGGGGTGCTTTTTGTCGTCGATACCTCGGCCAGCGT
GACCGAAAATGCGCGCTGGCCCCAGATGCTGACCATGGGGCGGTTTGGTATCGCGGCATTGGGCACACGTCCCGGCGGGT
TGATCGTTTTTGGCGGTGACGCCTATGTCGCATCCGACATGACGCTCGATCATCTGCAATTGGGTCAGACGTTGTCGCTG
CTGGATGCGCAGACGGTGCCGGACCCCGGCTCGCGCCCGGAACGCGGTCTTGCGATGGCGCTGGATGTGCTGCGCGAGGC
TGACGTGATCGCGGGGGATGTGGTTTTGTTGACCGATGGCGCTGGTCTGGGGTCTGAAACACTGCAAGTGGCAGCGCAGA
TCGCCGCGCAGGGCGCGCGCCTGTCGCTGGTGTCGCTGGACGCACCGTCGCCTGCCTTTGCGACCCATGCGACGGCGGGA
AAGGGCACGGTCTTTACCCTCGCAGAGACGGATGCGTTCTCGGCGTGGATGGCCGAAAGCGCCCGCACCCGGCTGGAAGC
GCAGAATTTTCCGCTGCTGTTCTGGAAAGACATGGGCCGCTATTTGCTGGTTCTGGCGCTGTTGCCACTGCTGTTGCTGT
TTCGCAGGCAGGTCGCATGA

Upstream 100 bases:

>100_bases
ACAGCGACGGCTTGGCCGCCGAAGTGTTCCACGACTACTGGATGTGGCCTGCGGGTCTTGCGGCCTTGCTTGGCCTCGGC
TACGGCTGGAGGGAGCTGAC

Downstream 100 bases:

>100_bases
GGGTGCTTGCGCTCCTCACGGTCGCGGCGGTTGCGCTTGCGCTGCTGCTTGGGGGGGCGGCCCCTTTCGGGCGCGTGTTG
ATGGCGGCAGGGATGCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; VWA Containing CoxE Family Protein

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSDLALTLLRPWWLLGLPVLIGVGWWMYTRRGGLGDWQKATDPALLRAMMALDRVDNSASRAPLLAMLSAVGVTLLALSG
PAVERRDALSFRNLDGVLFVVDTSASVTENARWPQMLTMGRFGIAALGTRPGGLIVFGGDAYVASDMTLDHLQLGQTLSL
LDAQTVPDPGSRPERGLAMALDVLREADVIAGDVVLLTDGAGLGSETLQVAAQIAAQGARLSLVSLDAPSPAFATHATAG
KGTVFTLAETDAFSAWMAESARTRLEAQNFPLLFWKDMGRYLLVLALLPLLLLFRRQVA

Sequences:

>Translated_299_residues
MSDLALTLLRPWWLLGLPVLIGVGWWMYTRRGGLGDWQKATDPALLRAMMALDRVDNSASRAPLLAMLSAVGVTLLALSG
PAVERRDALSFRNLDGVLFVVDTSASVTENARWPQMLTMGRFGIAALGTRPGGLIVFGGDAYVASDMTLDHLQLGQTLSL
LDAQTVPDPGSRPERGLAMALDVLREADVIAGDVVLLTDGAGLGSETLQVAAQIAAQGARLSLVSLDAPSPAFATHATAG
KGTVFTLAETDAFSAWMAESARTRLEAQNFPLLFWKDMGRYLLVLALLPLLLLFRRQVA
>Mature_298_residues
SDLALTLLRPWWLLGLPVLIGVGWWMYTRRGGLGDWQKATDPALLRAMMALDRVDNSASRAPLLAMLSAVGVTLLALSGP
AVERRDALSFRNLDGVLFVVDTSASVTENARWPQMLTMGRFGIAALGTRPGGLIVFGGDAYVASDMTLDHLQLGQTLSLL
DAQTVPDPGSRPERGLAMALDVLREADVIAGDVVLLTDGAGLGSETLQVAAQIAAQGARLSLVSLDAPSPAFATHATAGK
GTVFTLAETDAFSAWMAESARTRLEAQNFPLLFWKDMGRYLLVLALLPLLLLFRRQVA

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31955; Mature: 31823

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLALTLLRPWWLLGLPVLIGVGWWMYTRRGGLGDWQKATDPALLRAMMALDRVDNSAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
RAPLLAMLSAVGVTLLALSGPAVERRDALSFRNLDGVLFVVDTSASVTENARWPQMLTMG
CHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHC
RFGIAALGTRPGGLIVFGGDAYVASDMTLDHLQLGQTLSLLDAQTVPDPGSRPERGLAMA
CCCCEEECCCCCCEEEECCCEEEECCCCHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHH
LDVLREADVIAGDVVLLTDGAGLGSETLQVAAQIAAQGARLSLVSLDAPSPAFATHATAG
HHHHHHCCCEECCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCEECCCCC
KGTVFTLAETDAFSAWMAESARTRLEAQNFPLLFWKDMGRYLLVLALLPLLLLFRRQVA
CCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDLALTLLRPWWLLGLPVLIGVGWWMYTRRGGLGDWQKATDPALLRAMMALDRVDNSAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
RAPLLAMLSAVGVTLLALSGPAVERRDALSFRNLDGVLFVVDTSASVTENARWPQMLTMG
CHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHC
RFGIAALGTRPGGLIVFGGDAYVASDMTLDHLQLGQTLSLLDAQTVPDPGSRPERGLAMA
CCCCEEECCCCCCEEEECCCEEEECCCCHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHH
LDVLREADVIAGDVVLLTDGAGLGSETLQVAAQIAAQGARLSLVSLDAPSPAFATHATAG
HHHHHHCCCEECCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCEECCCCC
KGTVFTLAETDAFSAWMAESARTRLEAQNFPLLFWKDMGRYLLVLALLPLLLLFRRQVA
CCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA