Click here to switch to the map view.

The map label for this gene is 110678087

Identifier: 110678087

GI number: 110678087

Start: 691586

End: 692329

Strand: Direct

Name: 110678087

Synonym: RD1_0716

Alternate gene names: NA

Gene position: 691586-692329 (Clockwise)

Preceding gene: 110678086

Following gene: 110678088

Centisome position: 16.73

GC content: 58.33

Gene sequence:

>744_bases
ATGACGCGGTACACTGCAAGCACTGTGGTGCCGTGGTTCGCATCAAAACCGAAGGTATGGTATAGGAATCTGGTGCATAA
AGCGGTCTTGAAATTCACACTCCTGAGCGCCTTGTGGTTGGGCCTTCTGGCGACATCCGGCGGGGCAGAAGAACCGCGCG
CCGGTCTTATGTGGAACAAGACGGGCCTGCCCGCGGTGTTTCCGCTGCAGGTCAAAACAGCACCGGGTCAGGATTTCATG
ATGACGCTGGTGGATGCGCAAACCCATGCCCCGGCGCTTGCGGCCTTTATCGAGGGCGGGGAATTCTTCAAGGTGCTGGT
GCCGCCGGGGGAATATGACGTGCGATTTGCAACCGGTGCGCAGTGGCGCGGCGAAGCGGAGTTATTCGGCAAGGATGAAA
CGACGCTGTTCGTTCTGGATGGGCCGCTGCGCTTTGCCGTGATGGATTTTGCGACCAAACTGGGGCACGTGATTGATTTC
ACTGCCAGTGACGACGCCATCATGGTGAAGGCTCAGTTCATTTGTCAGCGGTTCAGCGTCGCAGAGTTTGCACGACCACA
GCCGCCGTTTGACGATCTGGAGGGCTATGCCACGCGGTTGACGCAGGAGGGGGAGTTGGTGCAATTCCCGAACCGTTTTG
CACCTGATCGCTTGTCCGCCGGCACGGATGATCCGGTGATTCCAACGGATTTCGCGCCCTACTTTTCCGATCCCGCCTAT
GAGGTGCGCGCATTTCCCTGTTGA

Upstream 100 bases:

>100_bases
GTGGTGGGCGTGGCCCTGTTTGTGCAGCTTGCGCGGGCCATCATCCAGCCGCCCAAGGTACAGTATACCTGTCAGTCCTG
CGGATTGACCAAACATGACC

Downstream 100 bases:

>100_bases
GCGCATAAAAAAAGCCGCCCGGGTGGGGCGGCCTTTTTTCGTGATTTGCTTGGTTTAACCCTGACGGGCTTTGAACCGGC
GTTGCGTCTTGTTGATGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTRYTASTVVPWFASKPKVWYRNLVHKAVLKFTLLSALWLGLLATSGGAEEPRAGLMWNKTGLPAVFPLQVKTAPGQDFM
MTLVDAQTHAPALAAFIEGGEFFKVLVPPGEYDVRFATGAQWRGEAELFGKDETTLFVLDGPLRFAVMDFATKLGHVIDF
TASDDAIMVKAQFICQRFSVAEFARPQPPFDDLEGYATRLTQEGELVQFPNRFAPDRLSAGTDDPVIPTDFAPYFSDPAY
EVRAFPC

Sequences:

>Translated_247_residues
MTRYTASTVVPWFASKPKVWYRNLVHKAVLKFTLLSALWLGLLATSGGAEEPRAGLMWNKTGLPAVFPLQVKTAPGQDFM
MTLVDAQTHAPALAAFIEGGEFFKVLVPPGEYDVRFATGAQWRGEAELFGKDETTLFVLDGPLRFAVMDFATKLGHVIDF
TASDDAIMVKAQFICQRFSVAEFARPQPPFDDLEGYATRLTQEGELVQFPNRFAPDRLSAGTDDPVIPTDFAPYFSDPAY
EVRAFPC
>Mature_246_residues
TRYTASTVVPWFASKPKVWYRNLVHKAVLKFTLLSALWLGLLATSGGAEEPRAGLMWNKTGLPAVFPLQVKTAPGQDFMM
TLVDAQTHAPALAAFIEGGEFFKVLVPPGEYDVRFATGAQWRGEAELFGKDETTLFVLDGPLRFAVMDFATKLGHVIDFT
ASDDAIMVKAQFICQRFSVAEFARPQPPFDDLEGYATRLTQEGELVQFPNRFAPDRLSAGTDDPVIPTDFAPYFSDPAYE
VRAFPC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27356; Mature: 27224

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRYTASTVVPWFASKPKVWYRNLVHKAVLKFTLLSALWLGLLATSGGAEEPRAGLMWNK
CCEECCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC
TGLPAVFPLQVKTAPGQDFMMTLVDAQTHAPALAAFIEGGEFFKVLVPPGEYDVRFATGA
CCCCEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEECCC
QWRGEAELFGKDETTLFVLDGPLRFAVMDFATKLGHVIDFTASDDAIMVKAQFICQRFSV
CCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHCCEEEECCCCCEEEEHHHHHHHHHHH
AEFARPQPPFDDLEGYATRLTQEGELVQFPNRFAPDRLSAGTDDPVIPTDFAPYFSDPAY
HHHCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EVRAFPC
EEEECCC
>Mature Secondary Structure 
TRYTASTVVPWFASKPKVWYRNLVHKAVLKFTLLSALWLGLLATSGGAEEPRAGLMWNK
CEECCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC
TGLPAVFPLQVKTAPGQDFMMTLVDAQTHAPALAAFIEGGEFFKVLVPPGEYDVRFATGA
CCCCEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEECCC
QWRGEAELFGKDETTLFVLDGPLRFAVMDFATKLGHVIDFTASDDAIMVKAQFICQRFSV
CCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHCCEEEECCCCCEEEEHHHHHHHHHHH
AEFARPQPPFDDLEGYATRLTQEGELVQFPNRFAPDRLSAGTDDPVIPTDFAPYFSDPAY
HHHCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EVRAFPC
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA