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The map label for this gene is lspA [H]

Identifier: 110678033

GI number: 110678033

Start: 635985

End: 636470

Strand: Direct

Name: lspA [H]

Synonym: RD1_0656

Alternate gene names: 110678033

Gene position: 635985-636470 (Clockwise)

Preceding gene: 110678032

Following gene: 110678034

Centisome position: 15.39

GC content: 57.41

Gene sequence:

>486_bases
ATGCGTTTGCTCTATGGGGCTGCCGTGATCGCGTTTCTGGTGGATCAGGTCAGCAAATACATCGTGATTCACATGATGGA
ATTGTGGCGCATTCGTGCGGTCGATGTTTTCCCGCCCTTTGTGAATTTTCGCTATGGCGAGAACCGGGGTATCAATTTTG
GCCTGTTTGACGGCGGGTCGGACGCAGCGCGGTGGGCTCTGATCGGCGTGGCGCTCGCCATCTGCACGTTCGTTTACATC
TGGTCGCGCAAATCGCAACTGGCGGGATGGGCGGCGGCGGCGGCCGGCCTGTTGATCGGCGGCGCGCTTGCGAATGTACT
GGATCGGTTGATCTATGGCTATGTGCTGGATTTTCTGAACATGTCGTGCTGCGGCATCGACAATCCGTTCGTGTTCAACC
TCGCTGACGTTTTCATTTTCATGGGCGCGATCGGCTTGGTATTCCTTGCGCCGGACCCGAAGGCCGATGCCAACAAGGGC
GGTTGA

Upstream 100 bases:

>100_bases
CGATGCGCGATGATGAGGTTATCGCCGCCGCGGATGAGGCAGGTCTCGCGATGGTGTTTACCGGCATGCGTCACTTCAGG
CACTGAACAAGGGGGCCGCC

Downstream 100 bases:

>100_bases
AAAAAGGTCAGTGACAACCGCCGTCGCTCTGGCGTATTGAGAAGTAACCGTGAGGAGACATGTTTCATGCGCATGAAAGT
GCCATTTCTTCTGTTAGCCA

Product: lipoprotein signal peptidase

Products: NA

Alternate protein names: Prolipoprotein signal peptidase; Signal peptidase II; SPase II [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRLLYGAAVIAFLVDQVSKYIVIHMMELWRIRAVDVFPPFVNFRYGENRGINFGLFDGGSDAARWALIGVALAICTFVYI
WSRKSQLAGWAAAAAGLLIGGALANVLDRLIYGYVLDFLNMSCCGIDNPFVFNLADVFIFMGAIGLVFLAPDPKADANKG
G

Sequences:

>Translated_161_residues
MRLLYGAAVIAFLVDQVSKYIVIHMMELWRIRAVDVFPPFVNFRYGENRGINFGLFDGGSDAARWALIGVALAICTFVYI
WSRKSQLAGWAAAAAGLLIGGALANVLDRLIYGYVLDFLNMSCCGIDNPFVFNLADVFIFMGAIGLVFLAPDPKADANKG
G
>Mature_161_residues
MRLLYGAAVIAFLVDQVSKYIVIHMMELWRIRAVDVFPPFVNFRYGENRGINFGLFDGGSDAARWALIGVALAICTFVYI
WSRKSQLAGWAAAAAGLLIGGALANVLDRLIYGYVLDFLNMSCCGIDNPFVFNLADVFIFMGAIGLVFLAPDPKADANKG
G

Specific function: This protein specifically catalyzes the removal of signal peptides from prolipoproteins [H]

COG id: COG0597

COG function: function code MU; Lipoprotein signal peptidase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001872 [H]

Pfam domain/function: PF01252 Peptidase_A8 [H]

EC number: =3.4.23.36 [H]

Molecular weight: Translated: 17550; Mature: 17550

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS00855 SPASE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLYGAAVIAFLVDQVSKYIVIHMMELWRIRAVDVFPPFVNFRYGENRGINFGLFDGGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEEEECCCC
DAARWALIGVALAICTFVYIWSRKSQLAGWAAAAAGLLIGGALANVLDRLIYGYVLDFLN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MSCCGIDNPFVFNLADVFIFMGAIGLVFLAPDPKADANKGG
CHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC
>Mature Secondary Structure
MRLLYGAAVIAFLVDQVSKYIVIHMMELWRIRAVDVFPPFVNFRYGENRGINFGLFDGGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEEEECCCC
DAARWALIGVALAICTFVYIWSRKSQLAGWAAAAAGLLIGGALANVLDRLIYGYVLDFLN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MSCCGIDNPFVFNLADVFIFMGAIGLVFLAPDPKADANKGG
CHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA