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The map label for this gene is 110677988

Identifier: 110677988

GI number: 110677988

Start: 591117

End: 591872

Strand: Direct

Name: 110677988

Synonym: RD1_0609

Alternate gene names: NA

Gene position: 591117-591872 (Clockwise)

Preceding gene: 110677986

Following gene: 110677989

Centisome position: 14.3

GC content: 57.94

Gene sequence:

>756_bases
ATGTCCGTAACCGAGATACGCCCGAATATGGAAAACTGGCAGGAACGCGTGGACCTTGCCGCCGCGTTTCGCTGGACGGC
CCGGTTGAACATGCATGAGGCGGTCGCCAATCACTTCAGCCTTGCCATCAATGACGACGGTACACAGTTTCTGATGAATC
CCAACCAGATGCATTTTTCCCGCATCAAGGCATCGGACCTGATCGTGGTTGATGCCAATGATCCTGATACCCTTTCGGGG
CCGGATGCGCCTGATCCCACGGCATGGGGCTTGCATGGTGGGTTGCACCGGCATTGCCCGCATGCGCGCTGCGCGATGCA
TGTGCATTCACCCTATGCCACGGCGCTTGCCAGTCTGGCCGACAGTCGCCTGCCGCCCGTGGATCAGAACGCCTGCATGT
TCTTTGATCGCGTCGTGATTGATGAAAACTACGGCGGGCTGGCCTTTGAGGAAGAGGGCGTGCGCTGTGCGCAGCTGTTT
GATGACCCAAGGAAAAAGGTCATGGTCATGGGCAATCACGGCATCATGGTGATCGGTGACACGGTGGCCGATACCTTTAA
CCGGATGTTCTATTTCGAACGGGCCTGCCAGACCTATCTGCTTGCCTTGCAAACCGGGCGGCCGTTGCGGGTGCTGCCCG
ATGATGTCGCAGAAAAGACCGCGCGCGAGATCGAAGATTACCCCGAACAGGATCTGCGGCATCTGGCCGAACTCAAGGCC
ATTCTGGATGAAGAAGGCGCCACCTATGCCCAATGA

Upstream 100 bases:

>100_bases
AACGTTTTCCATCTCACAAAAAGTGCATCGACGTCGTTTTTTTGTTGGTCAATGATGCCAAGGATGTGGTCTGCTTTGAG
CGACAAAACAGGAGAGTCGT

Downstream 100 bases:

>100_bases
CGCTGAGACGCGCGAGGCGGGGCGGTGGAATTATCGCCCGCCCGTACCGCTGGCGCAGAATCCGCTGTTTCAATGGCCCC
CCAAACCCGCAGCCATCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSVTEIRPNMENWQERVDLAAAFRWTARLNMHEAVANHFSLAINDDGTQFLMNPNQMHFSRIKASDLIVVDANDPDTLSG
PDAPDPTAWGLHGGLHRHCPHARCAMHVHSPYATALASLADSRLPPVDQNACMFFDRVVIDENYGGLAFEEEGVRCAQLF
DDPRKKVMVMGNHGIMVIGDTVADTFNRMFYFERACQTYLLALQTGRPLRVLPDDVAEKTAREIEDYPEQDLRHLAELKA
ILDEEGATYAQ

Sequences:

>Translated_251_residues
MSVTEIRPNMENWQERVDLAAAFRWTARLNMHEAVANHFSLAINDDGTQFLMNPNQMHFSRIKASDLIVVDANDPDTLSG
PDAPDPTAWGLHGGLHRHCPHARCAMHVHSPYATALASLADSRLPPVDQNACMFFDRVVIDENYGGLAFEEEGVRCAQLF
DDPRKKVMVMGNHGIMVIGDTVADTFNRMFYFERACQTYLLALQTGRPLRVLPDDVAEKTAREIEDYPEQDLRHLAELKA
ILDEEGATYAQ
>Mature_250_residues
SVTEIRPNMENWQERVDLAAAFRWTARLNMHEAVANHFSLAINDDGTQFLMNPNQMHFSRIKASDLIVVDANDPDTLSGP
DAPDPTAWGLHGGLHRHCPHARCAMHVHSPYATALASLADSRLPPVDQNACMFFDRVVIDENYGGLAFEEEGVRCAQLFD
DPRKKVMVMGNHGIMVIGDTVADTFNRMFYFERACQTYLLALQTGRPLRVLPDDVAEKTAREIEDYPEQDLRHLAELKAI
LDEEGATYAQ

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family [H]

Homologues:

Organism=Homo sapiens, GI9257190, Length=193, Percent_Identity=27.4611398963731, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI89276787, Length=193, Percent_Identity=27.4611398963731, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI297307160, Length=193, Percent_Identity=27.4611398963731, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI297307158, Length=193, Percent_Identity=27.4611398963731, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI9257192, Length=193, Percent_Identity=27.4611398963731, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI9943848, Length=190, Percent_Identity=25.7894736842105, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI29826325, Length=192, Percent_Identity=23.9583333333333, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI9951927, Length=190, Percent_Identity=25.7894736842105, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI62912453, Length=190, Percent_Identity=25.7894736842105, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI29826323, Length=192, Percent_Identity=23.9583333333333, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI29826321, Length=192, Percent_Identity=23.9583333333333, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI29826319, Length=192, Percent_Identity=23.9583333333333, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115533216, Length=198, Percent_Identity=25.2525252525253, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI115533218, Length=198, Percent_Identity=25.2525252525253, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI71989560, Length=216, Percent_Identity=27.3148148148148, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71989541, Length=216, Percent_Identity=27.3148148148148, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71989550, Length=216, Percent_Identity=27.3148148148148, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71989544, Length=216, Percent_Identity=27.3148148148148, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71989555, Length=216, Percent_Identity=27.3148148148148, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281363755, Length=219, Percent_Identity=27.8538812785388, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI281363751, Length=219, Percent_Identity=27.8538812785388, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24655690, Length=219, Percent_Identity=27.8538812785388, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24655685, Length=219, Percent_Identity=27.8538812785388, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI281363763, Length=219, Percent_Identity=27.8538812785388, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281363757, Length=219, Percent_Identity=27.8538812785388, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI17136738, Length=219, Percent_Identity=27.8538812785388, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281363761, Length=219, Percent_Identity=27.8538812785388, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281363759, Length=219, Percent_Identity=27.8538812785388, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281363753, Length=219, Percent_Identity=27.8538812785388, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 28225; Mature: 28094

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTEIRPNMENWQERVDLAAAFRWTARLNMHEAVANHFSLAINDDGTQFLMNPNQMHFS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCEEEECCCHHHHH
RIKASDLIVVDANDPDTLSGPDAPDPTAWGLHGGLHRHCPHARCAMHVHSPYATALASLA
HCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHEEEECCHHHHHHHHHH
DSRLPPVDQNACMFFDRVVIDENYGGLAFEEEGVRCAQLFDDPRKKVMVMGNHGIMVIGD
HCCCCCCCCCHHEEEEEEEEECCCCCCEECCCCCHHHHHHCCCCCEEEEECCCCEEEEEH
TVADTFNRMFYFERACQTYLLALQTGRPLRVLPDDVAEKTAREIEDYPEQDLRHLAELKA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHCCCHHHHHHHHHHHH
ILDEEGATYAQ
HHHCCCCCCCC
>Mature Secondary Structure 
SVTEIRPNMENWQERVDLAAAFRWTARLNMHEAVANHFSLAINDDGTQFLMNPNQMHFS
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCEEEECCCHHHHH
RIKASDLIVVDANDPDTLSGPDAPDPTAWGLHGGLHRHCPHARCAMHVHSPYATALASLA
HCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHEEEECCHHHHHHHHHH
DSRLPPVDQNACMFFDRVVIDENYGGLAFEEEGVRCAQLFDDPRKKVMVMGNHGIMVIGD
HCCCCCCCCCHHEEEEEEEEECCCCCCEECCCCCHHHHHHCCCCCEEEEECCCCEEEEEH
TVADTFNRMFYFERACQTYLLALQTGRPLRVLPDDVAEKTAREIEDYPEQDLRHLAELKA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHCCCHHHHHHHHHHHH
ILDEEGATYAQ
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]