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The map label for this gene is yibF [H]

Identifier: 110677946

GI number: 110677946

Start: 545243

End: 545845

Strand: Direct

Name: yibF [H]

Synonym: RD1_0562

Alternate gene names: 110677946

Gene position: 545243-545845 (Clockwise)

Preceding gene: 110677945

Following gene: 110677947

Centisome position: 13.19

GC content: 58.54

Gene sequence:

>603_bases
ATGAGACTATACCATTCGCCAGCGTCACCGTTCGTGCGCAAAGTCACCGTTTTGCTGCATGAGCTTGGTCAGACCGATGC
TGTGACGCTGAAAACGGTCACGACGACAGCGCTTGCGTCGGATGAGGCGCTCAAGACGGCCAATCCGCTGGCGCGTTTGC
CTGCGCTCGAACGGGACGACGGCATCACGCTCTATGACAGCCGCGTCATTACCGCCTATCTGAACGATCTGTTCAACGGC
GGGTTTTATCCGCAGAATTCATCGCGCTGGGAAACACTGACGCTGGAAGCGACAGGGGATGGCATGATGGATTCGGGTGT
CGCCATGGTCTATGAGACACGCCTGCGCGACGCCGAACAGGTCTCACAAGCGTGGATCGACGCGCAGTGGGCAAAGATCG
AGCGCACGCTTTTTGCCCTGAACACGCGTTGGATCAGCCATTTGTCAGGCCCTTTGACGATGGGGCAGATTTCGGTGGCC
TGTGCCTTGTCCTACCTCGATTTTCGGCACGACACGCGCAACTGGCGACAGGGAAACGAAGCACTCGCGAAATGGCACGC
GGGATTTGATTCGCGCCCCTCGATGCGTGCGACTCACCCTTGA

Upstream 100 bases:

>100_bases
GGGCACCGAGTTGAAACTGTTGTCGGCACTGATGCGCGCGGTGGATGGACAGACCTAGCTGCTCTGATACCATCCATATA
TACATAGTGAGGGCCATCCG

Downstream 100 bases:

>100_bases
ACGGCATGAACCTTTCTGAACCGTTCAAAAAAACAGGCCCAAAACGGGTTTTTGTCAAAAACATTAGGGGACTGCGACGG
TTTGCGCGTGCAAGGTCACT

Product: glutathione S-transferase family protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MRLYHSPASPFVRKVTVLLHELGQTDAVTLKTVTTTALASDEALKTANPLARLPALERDDGITLYDSRVITAYLNDLFNG
GFYPQNSSRWETLTLEATGDGMMDSGVAMVYETRLRDAEQVSQAWIDAQWAKIERTLFALNTRWISHLSGPLTMGQISVA
CALSYLDFRHDTRNWRQGNEALAKWHAGFDSRPSMRATHP

Sequences:

>Translated_200_residues
MRLYHSPASPFVRKVTVLLHELGQTDAVTLKTVTTTALASDEALKTANPLARLPALERDDGITLYDSRVITAYLNDLFNG
GFYPQNSSRWETLTLEATGDGMMDSGVAMVYETRLRDAEQVSQAWIDAQWAKIERTLFALNTRWISHLSGPLTMGQISVA
CALSYLDFRHDTRNWRQGNEALAKWHAGFDSRPSMRATHP
>Mature_200_residues
MRLYHSPASPFVRKVTVLLHELGQTDAVTLKTVTTTALASDEALKTANPLARLPALERDDGITLYDSRVITAYLNDLFNG
GFYPQNSSRWETLTLEATGDGMMDSGVAMVYETRLRDAEQVSQAWIDAQWAKIERTLFALNTRWISHLSGPLTMGQISVA
CALSYLDFRHDTRNWRQGNEALAKWHAGFDSRPSMRATHP

Specific function: Unknown

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790018, Length=205, Percent_Identity=30.7317073170732, Blast_Score=87, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 22430; Mature: 22430

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLYHSPASPFVRKVTVLLHELGQTDAVTLKTVTTTALASDEALKTANPLARLPALERDD
CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHCCHHHHCCCCCCCC
GITLYDSRVITAYLNDLFNGGFYPQNSSRWETLTLEATGDGMMDSGVAMVYETRLRDAEQ
CEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCHHEEHHHHHCCHHH
VSQAWIDAQWAKIERTLFALNTRWISHLSGPLTMGQISVACALSYLDFRHDTRNWRQGNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
ALAKWHAGFDSRPSMRATHP
HHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLYHSPASPFVRKVTVLLHELGQTDAVTLKTVTTTALASDEALKTANPLARLPALERDD
CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHCCHHHHCCCCCCCC
GITLYDSRVITAYLNDLFNGGFYPQNSSRWETLTLEATGDGMMDSGVAMVYETRLRDAEQ
CEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCHHEEHHHHHCCHHH
VSQAWIDAQWAKIERTLFALNTRWISHLSGPLTMGQISVACALSYLDFRHDTRNWRQGNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
ALAKWHAGFDSRPSMRATHP
HHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]