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The map label for this gene is petA [H]

Identifier: 110677947

GI number: 110677947

Start: 546052

End: 546612

Strand: Direct

Name: petA [H]

Synonym: RD1_0563

Alternate gene names: 110677947

Gene position: 546052-546612 (Clockwise)

Preceding gene: 110677946

Following gene: 110677948

Centisome position: 13.21

GC content: 58.65

Gene sequence:

>561_bases
GTGTCGCATGCAGAAGACCACGAAGGCACCCGGCGGGATTTCCTGTACTACGCTACGGCAGGTGCCGGTGCAGTAACCGC
GGGGGCCGCGATCTGGCCTTTGGTCAATCAAATGAACCCGACCGCGGATGTTTTGGCCTTGTCATCCATCCGGGTTGATG
TGAGCGGCCTTGAGCCGGGCACGCAATTGACCGTGAAATGGTTGGGCAAACCCGTATTCGTCCGTCGCCGGACCCAAGAG
GAAATCGACGCCGCGCGCGCCGTGGACCTTGCCGATCTGCCGGACCAATTGGCGGAAAACGCCAATATCGCGCCTGATGC
GGATGCATCCGATGAAAACCGTTCGCTGGATGAAAGCGGCGAATGGCTTGTCATGATGGGTGTTTGCACGCACTTTGGCT
GCGTTCCACTTGGCGATGCGGGTGATTATGGTGGGTGGTTCTGCCCCTGCCACGGGTCACATTACGACACTTCGGGTCGT
ATTCGCAAAGGCCCGGCACCAACAAACCTGCCGGTACCAACAGCAGTATTCGTGGATGATACCACGATCCAACTCGGGTA
A

Upstream 100 bases:

>100_bases
AAGTAGGTCGCGGCGCTACATACCCCGTCAAGCTACTGCCGCGCCTTGCGTGGCCAAATCGCTATTGGCCGGAAAATCGG
CCCCGAAGAGGAGTAAACCT

Downstream 100 bases:

>100_bases
GGGAGAAAACGAATGGGTGGAATTCCTCACGATCACTACGAGCCAAAGGCCGCCTGGGAGAAAAGTCTCGCCAAGCGTTT
GCCGATTGTTGGCTTGATGT

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MSHAEDHEGTRRDFLYYATAGAGAVTAGAAIWPLVNQMNPTADVLALSSIRVDVSGLEPGTQLTVKWLGKPVFVRRRTQE
EIDAARAVDLADLPDQLAENANIAPDADASDENRSLDESGEWLVMMGVCTHFGCVPLGDAGDYGGWFCPCHGSHYDTSGR
IRKGPAPTNLPVPTAVFVDDTTIQLG

Sequences:

>Translated_186_residues
MSHAEDHEGTRRDFLYYATAGAGAVTAGAAIWPLVNQMNPTADVLALSSIRVDVSGLEPGTQLTVKWLGKPVFVRRRTQE
EIDAARAVDLADLPDQLAENANIAPDADASDENRSLDESGEWLVMMGVCTHFGCVPLGDAGDYGGWFCPCHGSHYDTSGR
IRKGPAPTNLPVPTAVFVDDTTIQLG
>Mature_185_residues
SHAEDHEGTRRDFLYYATAGAGAVTAGAAIWPLVNQMNPTADVLALSSIRVDVSGLEPGTQLTVKWLGKPVFVRRRTQEE
IDAARAVDLADLPDQLAENANIAPDADASDENRSLDESGEWLVMMGVCTHFGCVPLGDAGDYGGWFCPCHGSHYDTSGRI
RKGPAPTNLPVPTAVFVDDTTIQLG

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=182, Percent_Identity=44.5054945054945, Blast_Score=160, Evalue=5e-40,
Organism=Caenorhabditis elegans, GI17540418, Length=184, Percent_Identity=45.1086956521739, Blast_Score=156, Evalue=5e-39,
Organism=Saccharomyces cerevisiae, GI6320811, Length=175, Percent_Identity=45.7142857142857, Blast_Score=168, Evalue=4e-43,
Organism=Drosophila melanogaster, GI24580896, Length=153, Percent_Identity=47.0588235294118, Blast_Score=151, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 19882; Mature: 19751

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHAEDHEGTRRDFLYYATAGAGAVTAGAAIWPLVNQMNPTADVLALSSIRVDVSGLEPG
CCCCCCCCCCCCEEEEEEECCCCCHHHCHHHHHHHHCCCCCHHHEEEEEEEEEECCCCCC
TQLTVKWLGKPVFVRRRTQEEIDAARAVDLADLPDQLAENANIAPDADASDENRSLDESG
CEEEEEECCCEEEEECCCHHHHHHHHHCCHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCC
EWLVMMGVCTHFGCVPLGDAGDYGGWFCPCHGSHYDTSGRIRKGPAPTNLPVPTAVFVDD
CEEEEEEHHHHCCCEECCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCEEEEECC
TTIQLG
EEEEEC
>Mature Secondary Structure 
SHAEDHEGTRRDFLYYATAGAGAVTAGAAIWPLVNQMNPTADVLALSSIRVDVSGLEPG
CCCCCCCCCCCEEEEEEECCCCCHHHCHHHHHHHHCCCCCHHHEEEEEEEEEECCCCCC
TQLTVKWLGKPVFVRRRTQEEIDAARAVDLADLPDQLAENANIAPDADASDENRSLDESG
CEEEEEECCCEEEEECCCHHHHHHHHHCCHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCC
EWLVMMGVCTHFGCVPLGDAGDYGGWFCPCHGSHYDTSGRIRKGPAPTNLPVPTAVFVDD
CEEEEEEHHHHCCCEECCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCEEEEECC
TTIQLG
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2821268; 3004982; 2821272; 1323023; 1313292 [H]