| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110677921
Identifier: 110677921
GI number: 110677921
Start: 521314
End: 522093
Strand: Direct
Name: 110677921
Synonym: RD1_0537
Alternate gene names: NA
Gene position: 521314-522093 (Clockwise)
Preceding gene: 110677901
Following gene: 110677922
Centisome position: 12.61
GC content: 62.82
Gene sequence:
>780_bases ATGGTGGGTGTGATCTATTGGGAAGACCTGCGCGCGCCGGATTTCAAATCACTGCCCGAAAGGGCAATCGCCGTTTTGCC CATGGGCGCGAGCGAACAGCATGGGCCGCATCTGGCGGTTTCGGTTGACAGCGATCTGGTGGAGGCCGTGCTTGCGCGCA CGCAGGTTGCTGATGGTTGTACCGTTCTGGTGCTGCCGACGCTGCGGGTCACCAAAAGTGCCGAGCATGACCGCCACCCC GGCACACTGAGCCTCACGGGCGACACGCTTCTGGCGGTTTTGCGCGACATCGCGGCCTCGGTTCACCGCGCCGGCATTGA TCGGTTGTGCCTGTTCAATGGCCACGGGGGCAACACCGCCCTGCTGGAGGTCGCCGTGCGGGACATGCGCATCACGCATG ACATGATAGCTGTGCACTGTGGCTGGTTCGGGTTCGCCCAAGCGCAGGCGCATTTTGATGCACAGGCACTGGCGATGGAT GTACATGGTGGTGACATCGAAACCTCTGCGATGTTGGCGGCGGCACCGGAGAAGGTCGATATGGCAAAGGCGCGGGATTT CCGCCCCGCCATGCAGGATTGGCCGCAGAAGTGGATCGGGCTGACCGGGCAGGTGGCGCGGCCCGGTTGGCTCATCGACG ATCTGAACGCCGACGGAGCTTGTGGCAATGCTGCGGCGGCGACTGTCGAAAAAGGCGAGGCGCTGTTGTCTTCGGCGGCG CGCAACTTTTCTGATTTTCTCGGTGAGTTGGCCGCCTTCGACCATCGCGCCAGCCTTTGA
Upstream 100 bases:
>100_bases CGAGGCAGCGAAATTGCAATTGGGATCACCCGATCGTTATTCATTGCATTGGGCAGGCCGTGTCGGGCAGGGTCAAAGCG CAACAGGAGGGACGGATCAA
Downstream 100 bases:
>100_bases AGGCCATTCAAGACGTCACGCAGAGCCGGTGCATCGACAGGCGCGTGCACCTGAAGGGGAGTGTTGCGATGAGCGAAATC AAAAGGCAATTCCGCCGGAC
Product: creatinine amidohydrolase
Products: creatine
Alternate protein names: Creatinine Amidohydrolase; Creatininase Subfamily; Amidase; Creatinine Amidohydrolase Protein; Creatininase Protein; Protein Amidase; Creatininase Family Protein; Creatinine Amidohydrolase Family Protein
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MVGVIYWEDLRAPDFKSLPERAIAVLPMGASEQHGPHLAVSVDSDLVEAVLARTQVADGCTVLVLPTLRVTKSAEHDRHP GTLSLTGDTLLAVLRDIAASVHRAGIDRLCLFNGHGGNTALLEVAVRDMRITHDMIAVHCGWFGFAQAQAHFDAQALAMD VHGGDIETSAMLAAAPEKVDMAKARDFRPAMQDWPQKWIGLTGQVARPGWLIDDLNADGACGNAAAATVEKGEALLSSAA RNFSDFLGELAAFDHRASL
Sequences:
>Translated_259_residues MVGVIYWEDLRAPDFKSLPERAIAVLPMGASEQHGPHLAVSVDSDLVEAVLARTQVADGCTVLVLPTLRVTKSAEHDRHP GTLSLTGDTLLAVLRDIAASVHRAGIDRLCLFNGHGGNTALLEVAVRDMRITHDMIAVHCGWFGFAQAQAHFDAQALAMD VHGGDIETSAMLAAAPEKVDMAKARDFRPAMQDWPQKWIGLTGQVARPGWLIDDLNADGACGNAAAATVEKGEALLSSAA RNFSDFLGELAAFDHRASL >Mature_259_residues MVGVIYWEDLRAPDFKSLPERAIAVLPMGASEQHGPHLAVSVDSDLVEAVLARTQVADGCTVLVLPTLRVTKSAEHDRHP GTLSLTGDTLLAVLRDIAASVHRAGIDRLCLFNGHGGNTALLEVAVRDMRITHDMIAVHCGWFGFAQAQAHFDAQALAMD VHGGDIETSAMLAAAPEKVDMAKARDFRPAMQDWPQKWIGLTGQVARPGWLIDDLNADGACGNAAAATVEKGEALLSSAA RNFSDFLGELAAFDHRASL
Specific function: Unknown
COG id: COG1402
COG function: function code R; Uncharacterized protein, putative amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.2.10
Molecular weight: Translated: 27650; Mature: 27650
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGVIYWEDLRAPDFKSLPERAIAVLPMGASEQHGPHLAVSVDSDLVEAVLARTQVADGC CEEEEEECCCCCCCHHHCHHHHEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCC TVLVLPTLRVTKSAEHDRHPGTLSLTGDTLLAVLRDIAASVHRAGIDRLCLFNGHGGNTA EEEEECCCHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHH LLEVAVRDMRITHDMIAVHCGWFGFAQAQAHFDAQALAMDVHGGDIETSAMLAAAPEKVD HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCCHHH MAKARDFRPAMQDWPQKWIGLTGQVARPGWLIDDLNADGACGNAAAATVEKGEALLSSAA HHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHH RNFSDFLGELAAFDHRASL HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVGVIYWEDLRAPDFKSLPERAIAVLPMGASEQHGPHLAVSVDSDLVEAVLARTQVADGC CEEEEEECCCCCCCHHHCHHHHEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCC TVLVLPTLRVTKSAEHDRHPGTLSLTGDTLLAVLRDIAASVHRAGIDRLCLFNGHGGNTA EEEEECCCHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHH LLEVAVRDMRITHDMIAVHCGWFGFAQAQAHFDAQALAMDVHGGDIETSAMLAAAPEKVD HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCCHHH MAKARDFRPAMQDWPQKWIGLTGQVARPGWLIDDLNADGACGNAAAATVEKGEALLSSAA HHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHH RNFSDFLGELAAFDHRASL HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: creatinine; H2O
Specific reaction: creatinine + H2O = creatine
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA