| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is maf [C]
Identifier: 110677831
GI number: 110677831
Start: 427445
End: 428044
Strand: Direct
Name: maf [C]
Synonym: RD1_0437
Alternate gene names: 110677831
Gene position: 427445-428044 (Clockwise)
Preceding gene: 110677830
Following gene: 110677832
Centisome position: 10.34
GC content: 54.5
Gene sequence:
>600_bases ATGCCCCAACCGCTCATCCTCGCGTCGACCTCTGAAATCCGCGCGAAAATGCTCAGCAATGCAGGTGTGCCGCATACCAC ATCAGGCGCACGTATTGATGAAGAAATGGTAAAGGAAGCCCTGCTGGCAGAGCAGGCCTCCCCCAGAGACATCGCCGATA CGCTCGCTGAAATGAAGGCGCGCAAGATCAGTGACAAAACCCCCGGCGCGATTGTTCTGGGCTGCGACCAGGTGTTGGAT CACCGTGGGGTTCTACTCTCAAAACCTGTCGATTCGCATGACGCGCTGACCCAATTGCAAGCCCTGCGCAATGATCGCCA CACGCTGTTGTCCGCTGCTGTCATCTGTGAAGATGGTAAACCAGTCTGGCGCCATGTCGGTGTTGTCAGATTGCGGATGC ATGATGTTTCCGATGCCTATTTGCAGGACTATGTGGCACGCAACTGGGACTCTATTCGGCATGCTGTAGGTGCCTATAAA CTGGAAGAGGAAGGTGTGCGGTTGTTTTCACGTATCGACGGCGATTATTTCACGGTACTGGGGTTGCCGCTGCTTGAACT GCTGTCTTACCTTGCCTTACGCGGAGACTTACCAAGATGA
Upstream 100 bases:
>100_bases GCATGAAACGATTGTGTTGTGAACCACCTTGAACCGCACCCGTGTTTTCCGCAGAAGTGTCCCTTAACCAATCCTTAACC TTGCCCCCAGGCTTATACAC
Downstream 100 bases:
>100_bases GCATGACAAAAATTCCGCTCGCGGGTGTCATGGGTGCGCCCATTGCGCACTCAAAGTCGCCGCAGCTTCACCGGCATTGG TTGGAAACCTATGGCATAAG
Product: septum formation protein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MPQPLILASTSEIRAKMLSNAGVPHTTSGARIDEEMVKEALLAEQASPRDIADTLAEMKARKISDKTPGAIVLGCDQVLD HRGVLLSKPVDSHDALTQLQALRNDRHTLLSAAVICEDGKPVWRHVGVVRLRMHDVSDAYLQDYVARNWDSIRHAVGAYK LEEEGVRLFSRIDGDYFTVLGLPLLELLSYLALRGDLPR
Sequences:
>Translated_199_residues MPQPLILASTSEIRAKMLSNAGVPHTTSGARIDEEMVKEALLAEQASPRDIADTLAEMKARKISDKTPGAIVLGCDQVLD HRGVLLSKPVDSHDALTQLQALRNDRHTLLSAAVICEDGKPVWRHVGVVRLRMHDVSDAYLQDYVARNWDSIRHAVGAYK LEEEGVRLFSRIDGDYFTVLGLPLLELLSYLALRGDLPR >Mature_198_residues PQPLILASTSEIRAKMLSNAGVPHTTSGARIDEEMVKEALLAEQASPRDIADTLAEMKARKISDKTPGAIVLGCDQVLDH RGVLLSKPVDSHDALTQLQALRNDRHTLLSAAVICEDGKPVWRHVGVVRLRMHDVSDAYLQDYVARNWDSIRHAVGAYKL EEEGVRLFSRIDGDYFTVLGLPLLELLSYLALRGDLPR
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family
Homologues:
Organism=Escherichia coli, GI87081830, Length=200, Percent_Identity=28.5, Blast_Score=71, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y437_ROSDO (Q16CZ1)
Other databases:
- EMBL: CP000362 - RefSeq: YP_680838.1 - ProteinModelPortal: Q16CZ1 - SMR: Q16CZ1 - STRING: Q16CZ1 - GeneID: 4198332 - GenomeReviews: CP000362_GR - KEGG: rde:RD1_0437 - NMPDR: fig|375451.6.peg.413 - eggNOG: COG0424 - HOGENOM: HBG414045 - OMA: LVLGCDQ - ProtClustDB: CLSK934317 - BioCyc: RDEN375451:RD1_0437-MONOMER - GO: GO:0005737 - HAMAP: MF_00528 - InterPro: IPR003697 - PIRSF: PIRSF006305
Pfam domain/function: PF02545 Maf
EC number: NA
Molecular weight: Translated: 22030; Mature: 21898
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00300 SRP54
Important sites: ACT_SITE 34-34
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQPLILASTSEIRAKMLSNAGVPHTTSGARIDEEMVKEALLAEQASPRDIADTLAEMKA CCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH RKISDKTPGAIVLGCDQVLDHRGVLLSKPVDSHDALTQLQALRNDRHTLLSAAVICEDGK HHCCCCCCCEEEEEHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVWRHVGVVRLRMHDVSDAYLQDYVARNWDSIRHAVGAYKLEEEGVRLFSRIDGDYFTVL HHHHHHCCCEEEHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH GLPLLELLSYLALRGDLPR HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PQPLILASTSEIRAKMLSNAGVPHTTSGARIDEEMVKEALLAEQASPRDIADTLAEMKA CCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH RKISDKTPGAIVLGCDQVLDHRGVLLSKPVDSHDALTQLQALRNDRHTLLSAAVICEDGK HHCCCCCCCEEEEEHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVWRHVGVVRLRMHDVSDAYLQDYVARNWDSIRHAVGAYKLEEEGVRLFSRIDGDYFTVL HHHHHHCCCEEEHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH GLPLLELLSYLALRGDLPR HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA