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The map label for this gene is 110677798

Identifier: 110677798

GI number: 110677798

Start: 392449

End: 392994

Strand: Direct

Name: 110677798

Synonym: RD1_0403

Alternate gene names: NA

Gene position: 392449-392994 (Clockwise)

Preceding gene: 110677796

Following gene: 110677807

Centisome position: 9.5

GC content: 59.71

Gene sequence:

>546_bases
ATGATCCGTCTGATATCGCTGCTTGTTGCGTTAACCGTCGCTTTGGCGGCCTGTGCTCCGACATCATCGGGCACGCGGCT
GGGCTCTGACGGCAAACCTTTGCCGCAGGTCTACCGAATCAAGGAGCGTGACACGGCGAATATTCAATTCCGGATGCTGG
ATGCGGTGAACGCCCTGCGCTCAGCCTCGGGTCAGGGCCCTGTGGCCCTTGATGCGCAATTGAATGCAGCGGCAGCGACC
CATTCGCGCGATATGTCCGTGCAAAACAGACCCTGGCATTTTGGGTCGGACGGATCCTCCCCCATTGATCGCGTGCAGCG
GGTGGGTTTTGCGGGCACGCTTGTGGGGGAAAACATCTCTGAAACCTATGAGACGGAGATCGAAACGCTCGGGGCATGGA
TGGAAAAGCCGGACACAAGGCGCGTGATCCTGTCCCCCGATGCGAATCGCCTCGGCTTTGCGTGGTTTCAGGAAGACAAC
GGCAAGATCTGGTGGACGCTGATTCTCGGAAAGGCATCCGGTGCGGGTGCCGGTCTGGGCAGCTGA

Upstream 100 bases:

>100_bases
GCAAATCAAACAGATGTCATCACACCAACCTGATGCGCGTGGGTTTGATATATCGCCGATTGCGCGATATGTGGCAACAC
GACCCTTTGAGGAGAACCGA

Downstream 100 bases:

>100_bases
TCCCTCAGGCGTTCAGCTGGATCAGTGTATCATTCTGAACCATCGCATAGATTTCTTCGATTTCAGGATTCGTCACCGCG
ATGCATCCCCATGTCCAATC

Product: SCP-like extracellular protein, putative

Products: NA

Alternate protein names: SCP-Like Extracellular Protein; SCP-Like Extracellular; Allergen V5/Tpx-1 ; Lipoprotein

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MIRLISLLVALTVALAACAPTSSGTRLGSDGKPLPQVYRIKERDTANIQFRMLDAVNALRSASGQGPVALDAQLNAAAAT
HSRDMSVQNRPWHFGSDGSSPIDRVQRVGFAGTLVGENISETYETEIETLGAWMEKPDTRRVILSPDANRLGFAWFQEDN
GKIWWTLILGKASGAGAGLGS

Sequences:

>Translated_181_residues
MIRLISLLVALTVALAACAPTSSGTRLGSDGKPLPQVYRIKERDTANIQFRMLDAVNALRSASGQGPVALDAQLNAAAAT
HSRDMSVQNRPWHFGSDGSSPIDRVQRVGFAGTLVGENISETYETEIETLGAWMEKPDTRRVILSPDANRLGFAWFQEDN
GKIWWTLILGKASGAGAGLGS
>Mature_181_residues
MIRLISLLVALTVALAACAPTSSGTRLGSDGKPLPQVYRIKERDTANIQFRMLDAVNALRSASGQGPVALDAQLNAAAAT
HSRDMSVQNRPWHFGSDGSSPIDRVQRVGFAGTLVGENISETYETEIETLGAWMEKPDTRRVILSPDANRLGFAWFQEDN
GKIWWTLILGKASGAGAGLGS

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19410; Mature: 19410

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLISLLVALTVALAACAPTSSGTRLGSDGKPLPQVYRIKERDTANIQFRMLDAVNALR
CHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHEEECCCCCCCEEEEHHHHHHHHH
SASGQGPVALDAQLNAAAATHSRDMSVQNRPWHFGSDGSSPIDRVQRVGFAGTLVGENIS
HCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCHH
ETYETEIETLGAWMEKPDTRRVILSPDANRLGFAWFQEDNGKIWWTLILGKASGAGAGLG
HHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCEEEEEEEEECCCCCCCCCC
S
C
>Mature Secondary Structure
MIRLISLLVALTVALAACAPTSSGTRLGSDGKPLPQVYRIKERDTANIQFRMLDAVNALR
CHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHEEECCCCCCCEEEEHHHHHHHHH
SASGQGPVALDAQLNAAAATHSRDMSVQNRPWHFGSDGSSPIDRVQRVGFAGTLVGENIS
HCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCHH
ETYETEIETLGAWMEKPDTRRVILSPDANRLGFAWFQEDNGKIWWTLILGKASGAGAGLG
HHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCEEEEEEEEECCCCCCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA