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The map label for this gene is 110677795

Identifier: 110677795

GI number: 110677795

Start: 389437

End: 390153

Strand: Direct

Name: 110677795

Synonym: RD1_0400

Alternate gene names: NA

Gene position: 389437-390153 (Clockwise)

Preceding gene: 110677790

Following gene: 110677796

Centisome position: 9.42

GC content: 60.25

Gene sequence:

>717_bases
GTGCAGGATCGGCTGACCTTGGTTAATAGGGCGTTTACAGTCCCTGCCGTTGTCACGCCTTTTCCCGATCTCTGGCGCAA
ACATATGCCGGGTGCCCACATCGTTCGCGACGCAGAAACGCTGGATCTGGAGGTGGGCGCACATGACCTGGTGATCCATG
CCATGTCGCTGCACTGGGCGAATGATCCGGTCGGTCAGTTGATCCAGTGTCGGCGCAGCATGAAGCCGGATGGCCTGATG
ATTGCGGCCACGCTGGGGGGGCAGACATTGCAGGAATTGCGCAACTGCCTTGGCGATGCAGAGATCGCACTCACCGGTGG
TCTGTCCCCGCGCATCGCCCCGATGGGGGAAATCCGCGATCTCGGGGCGCTGTTGCAGCGGGCAGGCTTTGCGCTGCCGG
TGGCGGACAGTGTGACGTTGCGGGCGCAATACCGCGACGCATTTCACCTCATGCGTGACCTGCGCAACATGGGTGAAACG
AACGCGCTGGAACAAAGGCGGCGCGTGACCCCGCCGCGCGCACTTTTTGAACGGATGGCGGCAATTTACGCAGAAAACTA
TGCAACACAGGCAGATCAGGTTATTGCGACGTTTGAAATGGTGTTTCTGACCGGATGGGCGGCAAGCGACACGCAACAAA
AGCCGCTTCGACCTGGTTCTGCAAAACAACGGCTCGCGGATGCCCTGCGTGTACCCGAGCAGCCGTTGCGTGATTGA

Upstream 100 bases:

>100_bases
GATAAAAGACACAAAACTGACCGACACGCAGGCTCTTGAACGACACCGCGCACGCGCAGTGGCGGGAGAACTGTTCTTGC
AAGAATCGGCAGCGGACGAA

Downstream 100 bases:

>100_bases
CCCGAGCCAAAAACCATCTATCTGACGGTCATGGCCTGTAGACAAGGAAAAGAACATGCTGGATAGCAGCTCCCACGCGA
ATGCAATGGCGCGGCCCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MQDRLTLVNRAFTVPAVVTPFPDLWRKHMPGAHIVRDAETLDLEVGAHDLVIHAMSLHWANDPVGQLIQCRRSMKPDGLM
IAATLGGQTLQELRNCLGDAEIALTGGLSPRIAPMGEIRDLGALLQRAGFALPVADSVTLRAQYRDAFHLMRDLRNMGET
NALEQRRRVTPPRALFERMAAIYAENYATQADQVIATFEMVFLTGWAASDTQQKPLRPGSAKQRLADALRVPEQPLRD

Sequences:

>Translated_238_residues
MQDRLTLVNRAFTVPAVVTPFPDLWRKHMPGAHIVRDAETLDLEVGAHDLVIHAMSLHWANDPVGQLIQCRRSMKPDGLM
IAATLGGQTLQELRNCLGDAEIALTGGLSPRIAPMGEIRDLGALLQRAGFALPVADSVTLRAQYRDAFHLMRDLRNMGET
NALEQRRRVTPPRALFERMAAIYAENYATQADQVIATFEMVFLTGWAASDTQQKPLRPGSAKQRLADALRVPEQPLRD
>Mature_238_residues
MQDRLTLVNRAFTVPAVVTPFPDLWRKHMPGAHIVRDAETLDLEVGAHDLVIHAMSLHWANDPVGQLIQCRRSMKPDGLM
IAATLGGQTLQELRNCLGDAEIALTGGLSPRIAPMGEIRDLGALLQRAGFALPVADSVTLRAQYRDAFHLMRDLRNMGET
NALEQRRRVTPPRALFERMAAIYAENYATQADQVIATFEMVFLTGWAASDTQQKPLRPGSAKQRLADALRVPEQPLRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI40018642, Length=199, Percent_Identity=38.1909547738693, Blast_Score=136, Evalue=2e-32,
Organism=Homo sapiens, GI86792933, Length=172, Percent_Identity=39.5348837209302, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17535003, Length=200, Percent_Identity=35, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI19922210, Length=205, Percent_Identity=41.4634146341463, Blast_Score=153, Evalue=8e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 26425; Mature: 26425

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDRLTLVNRAFTVPAVVTPFPDLWRKHMPGAHIVRDAETLDLEVGAHDLVIHAMSLHWA
CCCHHHHHHHHHCCCCHHCCCHHHHHHHCCCCCEEECCHHEEEECCCHHHHHHHHHHHCC
NDPVGQLIQCRRSMKPDGLMIAATLGGQTLQELRNCLGDAEIALTGGLSPRIAPMGEIRD
CCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHH
LGALLQRAGFALPVADSVTLRAQYRDAFHLMRDLRNMGETNALEQRRRVTPPRALFERMA
HHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
AIYAENYATQADQVIATFEMVFLTGWAASDTQQKPLRPGSAKQRLADALRVPEQPLRD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQDRLTLVNRAFTVPAVVTPFPDLWRKHMPGAHIVRDAETLDLEVGAHDLVIHAMSLHWA
CCCHHHHHHHHHCCCCHHCCCHHHHHHHCCCCCEEECCHHEEEECCCHHHHHHHHHHHCC
NDPVGQLIQCRRSMKPDGLMIAATLGGQTLQELRNCLGDAEIALTGGLSPRIAPMGEIRD
CCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHH
LGALLQRAGFALPVADSVTLRAQYRDAFHLMRDLRNMGETNALEQRRRVTPPRALFERMA
HHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
AIYAENYATQADQVIATFEMVFLTGWAASDTQQKPLRPGSAKQRLADALRVPEQPLRD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]