| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is argJ [H]
Identifier: 110677782
GI number: 110677782
Start: 376807
End: 378033
Strand: Direct
Name: argJ [H]
Synonym: RD1_0384
Alternate gene names: 110677782
Gene position: 376807-378033 (Clockwise)
Preceding gene: 110677781
Following gene: 110677783
Centisome position: 9.12
GC content: 59.66
Gene sequence:
>1227_bases ATGGCTAAAATTACCGTTGTATCGCCACTGGCACCCAAGAGGTTTCCAGAGATGCCGGTCATTGACGGCGTTTCGTTTTC GACCGTTGCCGCCGGGATCAAATACGAGGGTCGCGCTGATGTGATGCTGGCCAGACTGGCACCCGGCACAACAGTCGCGG GTGTCTTTACCAAATCGGCCACCCGTTCGGCCCCTGTGCTTGACTGCCAGGAAAAGCTGGGAGGGCCAGCGAAGGACGGC GCGGCCATTCTCGTGAATTCGGGTAACTCCAATGCCTTCACGGGGCGCAACGGGCGCGACGCCGTGGCCCGGATCGTGGG CGCCGTGGCGCGGGCCTGCGACGTGCCAGAAACCCGCGTGTTCACATCATCGACCGGCGTGATCGGAGAACCGCTGCCGT TCGAACGCATTACCGAGCGCCTCGACACTCTGGCAGCAACACTCGATCCCAACGCCATTGAGGCCGCCGCCGCCGCCATC ATGACAACGGATACCTTCACGAAAGGCGCGACGGCTTCTGTTGAAATCGACGGTAAAACAGTCTCTATCGCGGGGATTGC GAAAGGGTCGGGCATGATCGCGCCGGATATGGCGACCATGTTGGTCTATATCTTTACCGATGCCAGGATTGATCAAGGCA CCCTGCAATCCCTCGTCGCGACACATAACGAAAAGACTTTCAACTGTATCACCGTAGACAGTGATACGTCGACATCGGAC ACGGTGCTGGTCTGCGCCACCGGCGCATCAGGGGTGGATGTGGGTGACAGCGCGCCCTTTGGCGATGCGCTGCACAAAGT GATGAAAGATCTCGCCCATCTCGTCGTCAAGGACGGGGAGGGCGCAACGAAATTTGTCGAGATAACCGTCACCGGGGCCG CGTCTGACAAGGACGCAAAGACGCATGCGCTGTCGGTTGCCAATTCGCCCTTGGTCAAGACCGCCATCGCCGGTGAAGAC CCCAATTGGGGCCGCATCGTCATGGCAATCGGAAAATCCGGTGCCCCGGCGGACCGCGACGCGCTGTCGATCCGTTTCGG CGATGTGGAGGTCGCCCGAAAGGGCTGGGTGAACCCGGATTATGTCGAAGCGGAGGCGGCCGCGCATATGAAGGGACAGA ATATCTGCATCCACGTCGATATCGGACTGGGGTCAGGTAAGGCGACCGTTTGGACATGTGATCTGACCCATGGGTACATT GAAATCAACGCGGACTATCGGTCCTGA
Upstream 100 bases:
>100_bases AAACGCAGCTGCCGGAGCAGCGATTGAGGTGACGCCGTTTGAAAACGCAGATGAGCGGTTCGATCTGATCAACCGGTTCG ACCTTTTGGAATAACGAAAC
Downstream 100 bases:
>100_bases GACTGCAAAGGGTACGAGATGAAAACGGTTCTGGTGTCTGCGGTCGCATTGATCGACATTGACGGGCGGATTTTGCTGGC GCAACGACCAGAGGGGAAAG
Product: bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein
Products: NA
Alternate protein names: Glutamate N-acetyltransferase; Ornithine acetyltransferase; OATase; Ornithine transacetylase; Amino-acid acetyltransferase; N-acetylglutamate synthase; AGS [H]
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MAKITVVSPLAPKRFPEMPVIDGVSFSTVAAGIKYEGRADVMLARLAPGTTVAGVFTKSATRSAPVLDCQEKLGGPAKDG AAILVNSGNSNAFTGRNGRDAVARIVGAVARACDVPETRVFTSSTGVIGEPLPFERITERLDTLAATLDPNAIEAAAAAI MTTDTFTKGATASVEIDGKTVSIAGIAKGSGMIAPDMATMLVYIFTDARIDQGTLQSLVATHNEKTFNCITVDSDTSTSD TVLVCATGASGVDVGDSAPFGDALHKVMKDLAHLVVKDGEGATKFVEITVTGAASDKDAKTHALSVANSPLVKTAIAGED PNWGRIVMAIGKSGAPADRDALSIRFGDVEVARKGWVNPDYVEAEAAAHMKGQNICIHVDIGLGSGKATVWTCDLTHGYI EINADYRS
Sequences:
>Translated_408_residues MAKITVVSPLAPKRFPEMPVIDGVSFSTVAAGIKYEGRADVMLARLAPGTTVAGVFTKSATRSAPVLDCQEKLGGPAKDG AAILVNSGNSNAFTGRNGRDAVARIVGAVARACDVPETRVFTSSTGVIGEPLPFERITERLDTLAATLDPNAIEAAAAAI MTTDTFTKGATASVEIDGKTVSIAGIAKGSGMIAPDMATMLVYIFTDARIDQGTLQSLVATHNEKTFNCITVDSDTSTSD TVLVCATGASGVDVGDSAPFGDALHKVMKDLAHLVVKDGEGATKFVEITVTGAASDKDAKTHALSVANSPLVKTAIAGED PNWGRIVMAIGKSGAPADRDALSIRFGDVEVARKGWVNPDYVEAEAAAHMKGQNICIHVDIGLGSGKATVWTCDLTHGYI EINADYRS >Mature_407_residues AKITVVSPLAPKRFPEMPVIDGVSFSTVAAGIKYEGRADVMLARLAPGTTVAGVFTKSATRSAPVLDCQEKLGGPAKDGA AILVNSGNSNAFTGRNGRDAVARIVGAVARACDVPETRVFTSSTGVIGEPLPFERITERLDTLAATLDPNAIEAAAAAIM TTDTFTKGATASVEIDGKTVSIAGIAKGSGMIAPDMATMLVYIFTDARIDQGTLQSLVATHNEKTFNCITVDSDTSTSDT VLVCATGASGVDVGDSAPFGDALHKVMKDLAHLVVKDGEGATKFVEITVTGAASDKDAKTHALSVANSPLVKTAIAGEDP NWGRIVMAIGKSGAPADRDALSIRFGDVEVARKGWVNPDYVEAEAAAHMKGQNICIHVDIGLGSGKATVWTCDLTHGYIE INADYRS
Specific function: Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis:the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate [H]
COG id: COG1364
COG function: function code E; N-acetylglutamate synthase (N-acetylornithine aminotransferase)
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgJ family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323707, Length=423, Percent_Identity=35.6973995271868, Blast_Score=212, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002813 - InterPro: IPR016117 [H]
Pfam domain/function: PF01960 ArgJ [H]
EC number: =2.3.1.35; =2.3.1.1 [H]
Molecular weight: Translated: 42269; Mature: 42138
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKITVVSPLAPKRFPEMPVIDGVSFSTVAAGIKYEGRADVMLARLAPGTTVAGVFTKSA CCEEEEECCCCCCCCCCCCCCCCCCHHHHEECEEECCCCEEEEEECCCCCEEEEEEECCC TRSAPVLDCQEKLGGPAKDGAAILVNSGNSNAFTGRNGRDAVARIVGAVARACDVPETRV CCCCCCEEHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEE FTSSTGVIGEPLPFERITERLDTLAATLDPNAIEAAAAAIMTTDTFTKGATASVEIDGKT EECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCCCCEEEEEECCCE VSIAGIAKGSGMIAPDMATMLVYIFTDARIDQGTLQSLVATHNEKTFNCITVDSDTSTSD EEEEEEECCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC TVLVCATGASGVDVGDSAPFGDALHKVMKDLAHLVVKDGEGATKFVEITVTGAASDKDAK EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEEEEEEEECCCCCCCC THALSVANSPLVKTAIAGEDPNWGRIVMAIGKSGAPADRDALSIRFGDVEVARKGWVNPD CEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHHHHCCCCCC YVEAEAAAHMKGQNICIHVDIGLGSGKATVWTCDLTHGYIEINADYRS CCCHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEEEECCCC >Mature Secondary Structure AKITVVSPLAPKRFPEMPVIDGVSFSTVAAGIKYEGRADVMLARLAPGTTVAGVFTKSA CEEEEECCCCCCCCCCCCCCCCCCHHHHEECEEECCCCEEEEEECCCCCEEEEEEECCC TRSAPVLDCQEKLGGPAKDGAAILVNSGNSNAFTGRNGRDAVARIVGAVARACDVPETRV CCCCCCEEHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEE FTSSTGVIGEPLPFERITERLDTLAATLDPNAIEAAAAAIMTTDTFTKGATASVEIDGKT EECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCCCCCCEEEEEECCCE VSIAGIAKGSGMIAPDMATMLVYIFTDARIDQGTLQSLVATHNEKTFNCITVDSDTSTSD EEEEEEECCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC TVLVCATGASGVDVGDSAPFGDALHKVMKDLAHLVVKDGEGATKFVEITVTGAASDKDAK EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEEEEEEEECCCCCCCC THALSVANSPLVKTAIAGEDPNWGRIVMAIGKSGAPADRDALSIRFGDVEVARKGWVNPD CEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHHHHCCCCCC YVEAEAAAHMKGQNICIHVDIGLGSGKATVWTCDLTHGYIEINADYRS CCCHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA