Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110677747

Identifier: 110677747

GI number: 110677747

Start: 336530

End: 337429

Strand: Direct

Name: 110677747

Synonym: RD1_0345

Alternate gene names: NA

Gene position: 336530-337429 (Clockwise)

Preceding gene: 110677746

Following gene: 110677748

Centisome position: 8.14

GC content: 61.89

Gene sequence:

>900_bases
TTGCAGGCCGCACCACTGGCGGCGGAGGCACCGGAGTGGGTGCATCTGATGCCATCGGGTGCCATATCCGGGCGCGATGG
GCGCAGCTACACCGTGAGCAACCCGGACGCCTTGGTCGCGGCCTTTCACGCCCGTGGCGTCGATCTGCCCATCGACTACG
AGCATCAATCCGAGACGCACAAGGAAACGCGCGTCGGGCCGGTGCCTGTGGCGGGCTGGATCAAGGACATGAAGGCCCGC
GCGGATGGCATCTGGGGCCGTGTTGAATGGACCGCAGCCGCGCGCGACCTGATCAGCCAGAAAGCCTATCGCTATCTCAG
CCCGGTGATGATGCACCGCAAGGATGACAAAGAAGTGCTGCGTCTGAAGGGCGCGGGCCTTGTGCATCACCCCAACCTTA
CCCTTACCGCTCTTGCGTCTCAGGAGGACACCATGGACGATACACGCCCTTTCATGCACAAGATTGCAAAGCGTCTCGGC
CTTGCGGATGGTGCCAGCGAAGACGAGATCATGCAGACGCTCGAAGACGCGCTTGGCAAGACGCCTGACCCGGAAAAATA
TGTGCCCATCGCGGCGATGCAAAGCCTGATGGATGACCGTGCCCAGACGGCTACTGCCATGTCTGAAAGCCGTGCCCTGG
CAAAGGTCGAGGACGCGCTTGAAAAGGGCCACATAACGCCGGGGATGAAAGACTGGGCCACGTCGCTTTGCCGCCAGAAC
GAGGCCAGTTTTGACGCCTTCCTTGAGCGCTCAGGCAAGGTGTTTTCCAAGCTGCTGGAACCGACACACACCACGGCCCA
CCCGCCCAGTGTTCAGACCAGCACCGCGCGCGCCGAAAGCGAGATGGCGGTGTCGATCTGCCGCCAACTGGGGCTGGAAG
AAACGGCTCTGAATTCATGA

Upstream 100 bases:

>100_bases
AATTCAGTACGGGCGGCGGCACCAACCCTTGGCGCGGCACCGCTGAATTGATCGTCACCCCATTTCTGGCGGGCTGATCG
TGGCTGACCTGAGCACCAGC

Downstream 100 bases:

>100_bases
CATTCGCCGGGGCTGCTGTTGGTGACGGCCCCGGCGATGTGTGCGGCGTGTTCACTCATGCCCCGCACCCCGGCCCTCTG
GCGTTCGTTCATTCCGTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: I Protein; Prophage MuSo2 Protein; Mu-Like Prophage I Protein-Like Protein; Mu-Like Prophage I Protein-Like; Mu-Like Prophage FluMu I Protein; Prophage MuSo2 ; Protease Proteins; Mu Bacteriophage Protein I; Mu-Like Prophage Flumu I Protein; Phage Protease

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MQAAPLAAEAPEWVHLMPSGAISGRDGRSYTVSNPDALVAAFHARGVDLPIDYEHQSETHKETRVGPVPVAGWIKDMKAR
ADGIWGRVEWTAAARDLISQKAYRYLSPVMMHRKDDKEVLRLKGAGLVHHPNLTLTALASQEDTMDDTRPFMHKIAKRLG
LADGASEDEIMQTLEDALGKTPDPEKYVPIAAMQSLMDDRAQTATAMSESRALAKVEDALEKGHITPGMKDWATSLCRQN
EASFDAFLERSGKVFSKLLEPTHTTAHPPSVQTSTARAESEMAVSICRQLGLEETALNS

Sequences:

>Translated_299_residues
MQAAPLAAEAPEWVHLMPSGAISGRDGRSYTVSNPDALVAAFHARGVDLPIDYEHQSETHKETRVGPVPVAGWIKDMKAR
ADGIWGRVEWTAAARDLISQKAYRYLSPVMMHRKDDKEVLRLKGAGLVHHPNLTLTALASQEDTMDDTRPFMHKIAKRLG
LADGASEDEIMQTLEDALGKTPDPEKYVPIAAMQSLMDDRAQTATAMSESRALAKVEDALEKGHITPGMKDWATSLCRQN
EASFDAFLERSGKVFSKLLEPTHTTAHPPSVQTSTARAESEMAVSICRQLGLEETALNS
>Mature_299_residues
MQAAPLAAEAPEWVHLMPSGAISGRDGRSYTVSNPDALVAAFHARGVDLPIDYEHQSETHKETRVGPVPVAGWIKDMKAR
ADGIWGRVEWTAAARDLISQKAYRYLSPVMMHRKDDKEVLRLKGAGLVHHPNLTLTALASQEDTMDDTRPFMHKIAKRLG
LADGASEDEIMQTLEDALGKTPDPEKYVPIAAMQSLMDDRAQTATAMSESRALAKVEDALEKGHITPGMKDWATSLCRQN
EASFDAFLERSGKVFSKLLEPTHTTAHPPSVQTSTARAESEMAVSICRQLGLEETALNS

Specific function: Unknown

COG id: COG4388

COG function: function code R; Mu-like prophage I protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32753; Mature: 32753

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAAPLAAEAPEWVHLMPSGAISGRDGRSYTVSNPDALVAAFHARGVDLPIDYEHQSETH
CCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHH
KETRVGPVPVAGWIKDMKARADGIWGRVEWTAAARDLISQKAYRYLSPVMMHRKDDKEVL
HHHCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RLKGAGLVHHPNLTLTALASQEDTMDDTRPFMHKIAKRLGLADGASEDEIMQTLEDALGK
HHCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
TPDPEKYVPIAAMQSLMDDRAQTATAMSESRALAKVEDALEKGHITPGMKDWATSLCRQN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
EASFDAFLERSGKVFSKLLEPTHTTAHPPSVQTSTARAESEMAVSICRQLGLEETALNS
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MQAAPLAAEAPEWVHLMPSGAISGRDGRSYTVSNPDALVAAFHARGVDLPIDYEHQSETH
CCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHH
KETRVGPVPVAGWIKDMKARADGIWGRVEWTAAARDLISQKAYRYLSPVMMHRKDDKEVL
HHHCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RLKGAGLVHHPNLTLTALASQEDTMDDTRPFMHKIAKRLGLADGASEDEIMQTLEDALGK
HHCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
TPDPEKYVPIAAMQSLMDDRAQTATAMSESRALAKVEDALEKGHITPGMKDWATSLCRQN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
EASFDAFLERSGKVFSKLLEPTHTTAHPPSVQTSTARAESEMAVSICRQLGLEETALNS
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA