Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is suhB [H]

Identifier: 110677695

GI number: 110677695

Start: 283870

End: 284664

Strand: Direct

Name: suhB [H]

Synonym: RD1_0291

Alternate gene names: 110677695

Gene position: 283870-284664 (Clockwise)

Preceding gene: 110677694

Following gene: 110677696

Centisome position: 6.87

GC content: 62.89

Gene sequence:

>795_bases
TTGCAGGCGTCTGACCTTGATCTGATCACGGACGCAATCGTCATGGCGGGCCGGGTTGCGACCAGCTTCACCGGCCAGAG
CACGCAAAGCTGGGACAAGCCCGGCGGTGCAGGCCCCGTGACCGAAGCCGATCTGGCCGTGAACACCTATCTCGAAACCG
TGTTGCGGCTGGCCCGGCCAGACTACGGATGGCTGTCTGAGGAAAGCGAGGACACCGGCGATCGTCTGTCGCGTGATACG
GTGTTCATCATCGATCCGATAGACGGCACCCGCAGTTTCGTGGATGGCTCGAGCACATGGGCCCATTCGGTCGCCATATC
GCACAAGGGCCGCATCACCGCAGGGGCCGTCTATTTGCCGCTGCGCGGATTGCTGTACACGGCGGCGCGCGGAAAGGGTG
CGATGCTGAACGGTGCGCCGATCACCGTTTCCGCGAAAGATGATCTTGAAAACGCGGACGTATTGGCCGCCAAACCCATG
ATTGCGCCGGATCATTGGCCGAACGGGGTGCCCGGTTTCAACCGATCACACCGCCCCTCGCTGGCCTATCGACTGGCGCT
GGTTGGGCAGGGACGTTTCGATGCCATGCTGACGTTTCGGCCCACCTGGGAATGGGACGTTGCGGCAGGCTCCCTGATCG
TGGAGGAAGCCCAAGGGACATCCACGGACAAAGGCGGCAAGCCGCTGCTTTTCAACAATCGCGACCCACGGCTCAACGGT
ATGGTGGCGTCAGGCAAGCCGTTGCACTATAGCCTGATGCAAGCGCTCGCGCGCGAGGGCGGGAGCGGCGCTTGA

Upstream 100 bases:

>100_bases
GGCAACCTGCGGGACATGCTGCTGAACATTGTCCCCGCAAACGACGCGCGCGCGCATCTGAGCCGGGTCGTGCCCTCGCT
TCTTGTACCGGGGATGACAC

Downstream 100 bases:

>100_bases
CCCTGACGGGTGGATCGGCAACGCTGTTCTCACTCGCTTTTTGTTTTGAGGACTGCTTGCATGGCACAAAGGTTACATCT
CGTGTTTGGCGGTGAATTGG

Product: inositol monophosphatase family protein

Products: NA

Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MQASDLDLITDAIVMAGRVATSFTGQSTQSWDKPGGAGPVTEADLAVNTYLETVLRLARPDYGWLSEESEDTGDRLSRDT
VFIIDPIDGTRSFVDGSSTWAHSVAISHKGRITAGAVYLPLRGLLYTAARGKGAMLNGAPITVSAKDDLENADVLAAKPM
IAPDHWPNGVPGFNRSHRPSLAYRLALVGQGRFDAMLTFRPTWEWDVAAGSLIVEEAQGTSTDKGGKPLLFNNRDPRLNG
MVASGKPLHYSLMQALAREGGSGA

Sequences:

>Translated_264_residues
MQASDLDLITDAIVMAGRVATSFTGQSTQSWDKPGGAGPVTEADLAVNTYLETVLRLARPDYGWLSEESEDTGDRLSRDT
VFIIDPIDGTRSFVDGSSTWAHSVAISHKGRITAGAVYLPLRGLLYTAARGKGAMLNGAPITVSAKDDLENADVLAAKPM
IAPDHWPNGVPGFNRSHRPSLAYRLALVGQGRFDAMLTFRPTWEWDVAAGSLIVEEAQGTSTDKGGKPLLFNNRDPRLNG
MVASGKPLHYSLMQALAREGGSGA
>Mature_264_residues
MQASDLDLITDAIVMAGRVATSFTGQSTQSWDKPGGAGPVTEADLAVNTYLETVLRLARPDYGWLSEESEDTGDRLSRDT
VFIIDPIDGTRSFVDGSSTWAHSVAISHKGRITAGAVYLPLRGLLYTAARGKGAMLNGAPITVSAKDDLENADVLAAKPM
IAPDHWPNGVPGFNRSHRPSLAYRLALVGQGRFDAMLTFRPTWEWDVAAGSLIVEEAQGTSTDKGGKPLLFNNRDPRLNG
MVASGKPLHYSLMQALAREGGSGA

Specific function: Unknown

COG id: COG0483

COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the inositol monophosphatase family [H]

Homologues:

Organism=Homo sapiens, GI7657236, Length=229, Percent_Identity=30.5676855895196, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI5031789, Length=231, Percent_Identity=27.7056277056277, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI221625487, Length=207, Percent_Identity=28.9855072463768, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI221625507, Length=125, Percent_Identity=34.4, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI1788882, Length=268, Percent_Identity=30.5970149253731, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1790659, Length=203, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193202570, Length=251, Percent_Identity=33.4661354581673, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI193202572, Length=247, Percent_Identity=31.9838056680162, Blast_Score=87, Evalue=9e-18,
Organism=Saccharomyces cerevisiae, GI6320493, Length=222, Percent_Identity=27.9279279279279, Blast_Score=77, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24664918, Length=204, Percent_Identity=32.3529411764706, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21357957, Length=234, Percent_Identity=27.7777777777778, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI21357303, Length=252, Percent_Identity=31.3492063492063, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI21357329, Length=236, Percent_Identity=28.8135593220339, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020583
- InterPro:   IPR000760
- InterPro:   IPR020550
- InterPro:   IPR022337 [H]

Pfam domain/function: PF00459 Inositol_P [H]

EC number: =3.1.3.25 [H]

Molecular weight: Translated: 28183; Mature: 28183

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASDLDLITDAIVMAGRVATSFTGQSTQSWDKPGGAGPVTEADLAVNTYLETVLRLARP
CCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
DYGWLSEESEDTGDRLSRDTVFIIDPIDGTRSFVDGSSTWAHSVAISHKGRITAGAVYLP
CCCCCCCCCCCCHHHCCCCEEEEEECCCCCHHHCCCCCCEEEEEEEECCCCEEECEEEEH
LRGLLYTAARGKGAMLNGAPITVSAKDDLENADVLAAKPMIAPDHWPNGVPGFNRSHRPS
HHHHHHHHCCCCCCEECCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
LAYRLALVGQGRFDAMLTFRPTWEWDVAAGSLIVEEAQGTSTDKGGKPLLFNNRDPRLNG
EEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCC
MVASGKPLHYSLMQALAREGGSGA
EEECCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQASDLDLITDAIVMAGRVATSFTGQSTQSWDKPGGAGPVTEADLAVNTYLETVLRLARP
CCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
DYGWLSEESEDTGDRLSRDTVFIIDPIDGTRSFVDGSSTWAHSVAISHKGRITAGAVYLP
CCCCCCCCCCCCHHHCCCCEEEEEECCCCCHHHCCCCCCEEEEEEEECCCCEEECEEEEH
LRGLLYTAARGKGAMLNGAPITVSAKDDLENADVLAAKPMIAPDHWPNGVPGFNRSHRPS
HHHHHHHHCCCCCCEECCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
LAYRLALVGQGRFDAMLTFRPTWEWDVAAGSLIVEEAQGTSTDKGGKPLLFNNRDPRLNG
EEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCC
MVASGKPLHYSLMQALAREGGSGA
EEECCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]