| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is suhB [H]
Identifier: 110677695
GI number: 110677695
Start: 283870
End: 284664
Strand: Direct
Name: suhB [H]
Synonym: RD1_0291
Alternate gene names: 110677695
Gene position: 283870-284664 (Clockwise)
Preceding gene: 110677694
Following gene: 110677696
Centisome position: 6.87
GC content: 62.89
Gene sequence:
>795_bases TTGCAGGCGTCTGACCTTGATCTGATCACGGACGCAATCGTCATGGCGGGCCGGGTTGCGACCAGCTTCACCGGCCAGAG CACGCAAAGCTGGGACAAGCCCGGCGGTGCAGGCCCCGTGACCGAAGCCGATCTGGCCGTGAACACCTATCTCGAAACCG TGTTGCGGCTGGCCCGGCCAGACTACGGATGGCTGTCTGAGGAAAGCGAGGACACCGGCGATCGTCTGTCGCGTGATACG GTGTTCATCATCGATCCGATAGACGGCACCCGCAGTTTCGTGGATGGCTCGAGCACATGGGCCCATTCGGTCGCCATATC GCACAAGGGCCGCATCACCGCAGGGGCCGTCTATTTGCCGCTGCGCGGATTGCTGTACACGGCGGCGCGCGGAAAGGGTG CGATGCTGAACGGTGCGCCGATCACCGTTTCCGCGAAAGATGATCTTGAAAACGCGGACGTATTGGCCGCCAAACCCATG ATTGCGCCGGATCATTGGCCGAACGGGGTGCCCGGTTTCAACCGATCACACCGCCCCTCGCTGGCCTATCGACTGGCGCT GGTTGGGCAGGGACGTTTCGATGCCATGCTGACGTTTCGGCCCACCTGGGAATGGGACGTTGCGGCAGGCTCCCTGATCG TGGAGGAAGCCCAAGGGACATCCACGGACAAAGGCGGCAAGCCGCTGCTTTTCAACAATCGCGACCCACGGCTCAACGGT ATGGTGGCGTCAGGCAAGCCGTTGCACTATAGCCTGATGCAAGCGCTCGCGCGCGAGGGCGGGAGCGGCGCTTGA
Upstream 100 bases:
>100_bases GGCAACCTGCGGGACATGCTGCTGAACATTGTCCCCGCAAACGACGCGCGCGCGCATCTGAGCCGGGTCGTGCCCTCGCT TCTTGTACCGGGGATGACAC
Downstream 100 bases:
>100_bases CCCTGACGGGTGGATCGGCAACGCTGTTCTCACTCGCTTTTTGTTTTGAGGACTGCTTGCATGGCACAAAGGTTACATCT CGTGTTTGGCGGTGAATTGG
Product: inositol monophosphatase family protein
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MQASDLDLITDAIVMAGRVATSFTGQSTQSWDKPGGAGPVTEADLAVNTYLETVLRLARPDYGWLSEESEDTGDRLSRDT VFIIDPIDGTRSFVDGSSTWAHSVAISHKGRITAGAVYLPLRGLLYTAARGKGAMLNGAPITVSAKDDLENADVLAAKPM IAPDHWPNGVPGFNRSHRPSLAYRLALVGQGRFDAMLTFRPTWEWDVAAGSLIVEEAQGTSTDKGGKPLLFNNRDPRLNG MVASGKPLHYSLMQALAREGGSGA
Sequences:
>Translated_264_residues MQASDLDLITDAIVMAGRVATSFTGQSTQSWDKPGGAGPVTEADLAVNTYLETVLRLARPDYGWLSEESEDTGDRLSRDT VFIIDPIDGTRSFVDGSSTWAHSVAISHKGRITAGAVYLPLRGLLYTAARGKGAMLNGAPITVSAKDDLENADVLAAKPM IAPDHWPNGVPGFNRSHRPSLAYRLALVGQGRFDAMLTFRPTWEWDVAAGSLIVEEAQGTSTDKGGKPLLFNNRDPRLNG MVASGKPLHYSLMQALAREGGSGA >Mature_264_residues MQASDLDLITDAIVMAGRVATSFTGQSTQSWDKPGGAGPVTEADLAVNTYLETVLRLARPDYGWLSEESEDTGDRLSRDT VFIIDPIDGTRSFVDGSSTWAHSVAISHKGRITAGAVYLPLRGLLYTAARGKGAMLNGAPITVSAKDDLENADVLAAKPM IAPDHWPNGVPGFNRSHRPSLAYRLALVGQGRFDAMLTFRPTWEWDVAAGSLIVEEAQGTSTDKGGKPLLFNNRDPRLNG MVASGKPLHYSLMQALAREGGSGA
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=229, Percent_Identity=30.5676855895196, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI5031789, Length=231, Percent_Identity=27.7056277056277, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI221625487, Length=207, Percent_Identity=28.9855072463768, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI221625507, Length=125, Percent_Identity=34.4, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1788882, Length=268, Percent_Identity=30.5970149253731, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1790659, Length=203, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193202570, Length=251, Percent_Identity=33.4661354581673, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI193202572, Length=247, Percent_Identity=31.9838056680162, Blast_Score=87, Evalue=9e-18, Organism=Saccharomyces cerevisiae, GI6320493, Length=222, Percent_Identity=27.9279279279279, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI24664918, Length=204, Percent_Identity=32.3529411764706, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI21357957, Length=234, Percent_Identity=27.7777777777778, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI21357303, Length=252, Percent_Identity=31.3492063492063, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI21357329, Length=236, Percent_Identity=28.8135593220339, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 28183; Mature: 28183
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQASDLDLITDAIVMAGRVATSFTGQSTQSWDKPGGAGPVTEADLAVNTYLETVLRLARP CCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC DYGWLSEESEDTGDRLSRDTVFIIDPIDGTRSFVDGSSTWAHSVAISHKGRITAGAVYLP CCCCCCCCCCCCHHHCCCCEEEEEECCCCCHHHCCCCCCEEEEEEEECCCCEEECEEEEH LRGLLYTAARGKGAMLNGAPITVSAKDDLENADVLAAKPMIAPDHWPNGVPGFNRSHRPS HHHHHHHHCCCCCCEECCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC LAYRLALVGQGRFDAMLTFRPTWEWDVAAGSLIVEEAQGTSTDKGGKPLLFNNRDPRLNG EEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCC MVASGKPLHYSLMQALAREGGSGA EEECCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQASDLDLITDAIVMAGRVATSFTGQSTQSWDKPGGAGPVTEADLAVNTYLETVLRLARP CCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC DYGWLSEESEDTGDRLSRDTVFIIDPIDGTRSFVDGSSTWAHSVAISHKGRITAGAVYLP CCCCCCCCCCCCHHHCCCCEEEEEECCCCCHHHCCCCCCEEEEEEEECCCCEEECEEEEH LRGLLYTAARGKGAMLNGAPITVSAKDDLENADVLAAKPMIAPDHWPNGVPGFNRSHRPS HHHHHHHHCCCCCCEECCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC LAYRLALVGQGRFDAMLTFRPTWEWDVAAGSLIVEEAQGTSTDKGGKPLLFNNRDPRLNG EEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCC MVASGKPLHYSLMQALAREGGSGA EEECCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]