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The map label for this gene is ycaQ [H]

Identifier: 110677641

GI number: 110677641

Start: 234760

End: 235971

Strand: Direct

Name: ycaQ [H]

Synonym: RD1_0235

Alternate gene names: 110677641

Gene position: 234760-235971 (Clockwise)

Preceding gene: 110677640

Following gene: 110677644

Centisome position: 5.68

GC content: 61.47

Gene sequence:

>1212_bases
ATGAACACGCTCACCCTGAGCAATACAGACGCCCGGCAGTTGTTTCTGGACCGGCATGCCCTTGCTGAAACGCCTGCCGG
TGCGGCACAGGGTGATGCGCTTCTGGACCTCATCCGCAGACTTGGGTTTGTCCAGTTGGACAGCATCAACACCGTGGCGC
GGGCGCATGACCTGATCCTTTTTGCGCGACGGCCCCGCTACCGTCCTGAGGCGCTCAAGTCGCTTTATGAAACAGACCAC
GCCCTGTTTGAGCATTGGACACATGATGCTGCAGTCATTCCGATGGAATTTTATTCTTGGTGGCAACTGCGACGGCAGCG
CGACGCGGAAAAGCTGCGCAAACAGTGGAAAAACGGGCGGCGTGGCGGGTTCGAGGCGCAATTTCAAACAATCCTCGATC
AAATTCGCGAGCAAGGGCCTGTCAGCTCATCCGATGTCGGGGCCGGTGAAAAACGTGGTTCAGGCGGGTGGTGGGACTGG
CACCCGTCCAAGACCGCCTTGGAATACCTCTGGCGCAGCGGGGCGCTGTGCGTCGTGGGGCGGGACGGCTTCCGGAAACG
CTATGACCTGACGGAGCGCGTGGTGGACGCCGCCCTGCGCGATGCGCCCCTGTCGCAGGACCGGCAGAAAGCAACGATTG
ACTGGTGCTGCACCGGTGCATTGGACCGTTTGGGGTTTGCGACCCCGACCGAACTGGCCGCGTTCTGGGACCACATCACC
TTGGCAGAGGCAAAGGAATGGTGTGCGGCGCAGTTGGCCAAGGGGTGCTTGCAGCCTGTTCAGATCACCTGCGCTGACGG
GGGTGCGCGTCACAGTTTTGCGCGCCCGGATCTCGCCGCCGATCCCGCGCTTGAACGCCGGGCGAGCAAGCGATTGCGCG
TGCTCAGCCCTTTTGATCCGGCTCTGAGGGATCGCAAACGGGCGGAGCGGTTGTTTGGGTTTACGTACCGAATTGAGGTG
TTTGTGCCTGAAGCAAAGCGCACATATGGCTACTATGTCTTCCCCATTCTTCAGGGTGACAAAATCATCGCCCGCGTCGA
TATGAAGGCCTTCCGCAATGAGGACGTGCTCCGGGTCAAAGCCCTGTGGCCCGAGCCCGGCCTGCGCTGGGGCAAGGGTC
GCCAATCGGCATTCGAGGGGGAACTGACCCGTTTGACCCGACTTGCCGGCGTCAGCAAGGTCGGATTCGAAGACGGCTGG
CTGCGGGCCTAG

Upstream 100 bases:

>100_bases
GCAGTGCCGCGCTGGATACCGAAGACAGTTTCGAGCCCGAACATATCACCCTTGCGCCCAAGATTTCCTATGGTCAGACG
CTGCGTCGCCACGGGCAGGG

Downstream 100 bases:

>100_bases
AGCGTCTGACGAAATACCTGAAACATCGAGTATCACGTAACGCGTTGAAATCCTTGATTTCAGGCAGCGTTACGCGATTC
AGGTTTTTCGCATGACGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MNTLTLSNTDARQLFLDRHALAETPAGAAQGDALLDLIRRLGFVQLDSINTVARAHDLILFARRPRYRPEALKSLYETDH
ALFEHWTHDAAVIPMEFYSWWQLRRQRDAEKLRKQWKNGRRGGFEAQFQTILDQIREQGPVSSSDVGAGEKRGSGGWWDW
HPSKTALEYLWRSGALCVVGRDGFRKRYDLTERVVDAALRDAPLSQDRQKATIDWCCTGALDRLGFATPTELAAFWDHIT
LAEAKEWCAAQLAKGCLQPVQITCADGGARHSFARPDLAADPALERRASKRLRVLSPFDPALRDRKRAERLFGFTYRIEV
FVPEAKRTYGYYVFPILQGDKIIARVDMKAFRNEDVLRVKALWPEPGLRWGKGRQSAFEGELTRLTRLAGVSKVGFEDGW
LRA

Sequences:

>Translated_403_residues
MNTLTLSNTDARQLFLDRHALAETPAGAAQGDALLDLIRRLGFVQLDSINTVARAHDLILFARRPRYRPEALKSLYETDH
ALFEHWTHDAAVIPMEFYSWWQLRRQRDAEKLRKQWKNGRRGGFEAQFQTILDQIREQGPVSSSDVGAGEKRGSGGWWDW
HPSKTALEYLWRSGALCVVGRDGFRKRYDLTERVVDAALRDAPLSQDRQKATIDWCCTGALDRLGFATPTELAAFWDHIT
LAEAKEWCAAQLAKGCLQPVQITCADGGARHSFARPDLAADPALERRASKRLRVLSPFDPALRDRKRAERLFGFTYRIEV
FVPEAKRTYGYYVFPILQGDKIIARVDMKAFRNEDVLRVKALWPEPGLRWGKGRQSAFEGELTRLTRLAGVSKVGFEDGW
LRA
>Mature_403_residues
MNTLTLSNTDARQLFLDRHALAETPAGAAQGDALLDLIRRLGFVQLDSINTVARAHDLILFARRPRYRPEALKSLYETDH
ALFEHWTHDAAVIPMEFYSWWQLRRQRDAEKLRKQWKNGRRGGFEAQFQTILDQIREQGPVSSSDVGAGEKRGSGGWWDW
HPSKTALEYLWRSGALCVVGRDGFRKRYDLTERVVDAALRDAPLSQDRQKATIDWCCTGALDRLGFATPTELAAFWDHIT
LAEAKEWCAAQLAKGCLQPVQITCADGGARHSFARPDLAADPALERRASKRLRVLSPFDPALRDRKRAERLFGFTYRIEV
FVPEAKRTYGYYVFPILQGDKIIARVDMKAFRNEDVLRVKALWPEPGLRWGKGRQSAFEGELTRLTRLAGVSKVGFEDGW
LRA

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=404, Percent_Identity=30.9405940594059, Blast_Score=168, Evalue=6e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 45915; Mature: 45915

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLTLSNTDARQLFLDRHALAETPAGAAQGDALLDLIRRLGFVQLDSINTVARAHDLIL
CCCEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHEE
FARRPRYRPEALKSLYETDHALFEHWTHDAAVIPMEFYSWWQLRRQRDAEKLRKQWKNGR
EECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
RGGFEAQFQTILDQIREQGPVSSSDVGAGEKRGSGGWWDWHPSKTALEYLWRSGALCVVG
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEC
RDGFRKRYDLTERVVDAALRDAPLSQDRQKATIDWCCTGALDRLGFATPTELAAFWDHIT
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LAEAKEWCAAQLAKGCLQPVQITCADGGARHSFARPDLAADPALERRASKRLRVLSPFDP
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCEEEECCCCH
ALRDRKRAERLFGFTYRIEVFVPEAKRTYGYYVFPILQGDKIIARVDMKAFRNEDVLRVK
HHHHHHHHHHHHCEEEEEEEEECCCCCCCCEEEEEEECCCEEEEEECHHHHCCCCEEEEE
ALWPEPGLRWGKGRQSAFEGELTRLTRLAGVSKVGFEDGWLRA
EECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCC
>Mature Secondary Structure
MNTLTLSNTDARQLFLDRHALAETPAGAAQGDALLDLIRRLGFVQLDSINTVARAHDLIL
CCCEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHEE
FARRPRYRPEALKSLYETDHALFEHWTHDAAVIPMEFYSWWQLRRQRDAEKLRKQWKNGR
EECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
RGGFEAQFQTILDQIREQGPVSSSDVGAGEKRGSGGWWDWHPSKTALEYLWRSGALCVVG
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEC
RDGFRKRYDLTERVVDAALRDAPLSQDRQKATIDWCCTGALDRLGFATPTELAAFWDHIT
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LAEAKEWCAAQLAKGCLQPVQITCADGGARHSFARPDLAADPALERRASKRLRVLSPFDP
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCEEEECCCCH
ALRDRKRAERLFGFTYRIEVFVPEAKRTYGYYVFPILQGDKIIARVDMKAFRNEDVLRVK
HHHHHHHHHHHHCEEEEEEEEECCCCCCCCEEEEEEECCCEEEEEECHHHHCCCCEEEEE
ALWPEPGLRWGKGRQSAFEGELTRLTRLAGVSKVGFEDGWLRA
EECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]