Click here to switch to the map view.

The map label for this gene is yfiI [H]

Identifier: 110677632

GI number: 110677632

Start: 223684

End: 224817

Strand: Direct

Name: yfiI [H]

Synonym: RD1_0224

Alternate gene names: 110677632

Gene position: 223684-224817 (Clockwise)

Preceding gene: 110677631

Following gene: 110677633

Centisome position: 5.41

GC content: 62.17

Gene sequence:

>1134_bases
ATGACACGATTGAACTGGGGTATGATCGGCGGCGGCGAAGGCAGCCAGATTGGCCCCGCGCACCGTCTCGGCGCGCAGGC
TGATGGCAATTTCGTTCTGGCGGCGGGCGCGCTGGACGTGGACGCGGAAAAAGGCAAAGCCTATGCGCAAAGCCTTGGCG
TGTCGGCGCAGCGTTCCTATGCCAATTGGCAGGACATGCTGGAGGGGGAAAAGAACCACCCGGATCGGCTGGACCTGATC
ACCGTGGCCACGCCAAATTCCACACATTTTGAGATCACAAAGGCCTTTCTTGAGGCCGGGTTCAACGTGCTGTGCGAAAA
GCCCATGACCATGACCGTAGATCAGGGCGAAGAGATCGTCCGCGTGGCGAAAGCATCCGGCAAGATCTGCGCGGTCAATT
ACTGCTATTCAGCCTACCCGATGGTGCGCCAGATGCGGCAGATGGTGGCCGCTGGTGAGATCGGCAAGGTGCGGCTGATC
GTGACCAACTTCAGCCATGGGCACCACGGCGATGCGACGGATGCGGATAACCCGCGCGTGCGCTGGCGGTATGATCCGGC
GATGGCGGGCGTGTCGGGGCAATTTGCGGATTGCGGCATTCACGCGCTGCATATGGCCAGCTTCATTGCCGGGGATGAGG
TGCGCAGCCTGTCGGCGGATTTCGCTTCGACCATCGACAGCCGGGTTCTTGAGGACGATGCGATGGTGAATTTTCGCATG
GAAGGCGGCACGGTCGGGCGGCTGTGGTCATCTTCGGTCGCCATTGGTCGCCAGCACGGGTTTGACATTCAGGTCTTTGG
CGAAACCGGGGGCATGCGGTGGGCGTCCGAACAGCCGAACCAGGTTTTCTACACCCCCGTTGGCGGGCGCACGCAGATCA
TGGAAAAAGGCGAAGCAGGTCTGTCTGACGAAGCCGCGCGCCTGAGCCGTGTCGCCATTGCGCATCCCGAAGGGTTCCCG
CTGGCCGTCGCCAATATCTATGTTGATCTGGCCGCCGCAATCCGCGGGCAGCGACGCGACAGCTTGCCCACGGCCGAGGA
TGGCCTGCGCTCCATGGCGGCGGTTTATGCTGCGGTGGACTCTGCCGTTCAGGATGGCAAATGGGTGGATGCCCGCCCAC
CAAGCCTGCGATGA

Upstream 100 bases:

>100_bases
GATTGCGACCCGACCTTGCCCGATACGGATTCGCTGCGGGATGCCAAGCTGAACCGGGCCTATCTCGAAACCATCGGTTT
TAGCTGAGAAAGAAGCGGAT

Downstream 100 bases:

>100_bases
ACAAGACAGTGTCGCACCGGCGCTCGATTCACGCTGCCGTTTCCCTGTTTGTTGGGGGTCGAATTTACCGTACGTAGACG
TATGATGCCGTCGTCGCGTT

Product: oxidoreductase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MTRLNWGMIGGGEGSQIGPAHRLGAQADGNFVLAAGALDVDAEKGKAYAQSLGVSAQRSYANWQDMLEGEKNHPDRLDLI
TVATPNSTHFEITKAFLEAGFNVLCEKPMTMTVDQGEEIVRVAKASGKICAVNYCYSAYPMVRQMRQMVAAGEIGKVRLI
VTNFSHGHHGDATDADNPRVRWRYDPAMAGVSGQFADCGIHALHMASFIAGDEVRSLSADFASTIDSRVLEDDAMVNFRM
EGGTVGRLWSSSVAIGRQHGFDIQVFGETGGMRWASEQPNQVFYTPVGGRTQIMEKGEAGLSDEAARLSRVAIAHPEGFP
LAVANIYVDLAAAIRGQRRDSLPTAEDGLRSMAAVYAAVDSAVQDGKWVDARPPSLR

Sequences:

>Translated_377_residues
MTRLNWGMIGGGEGSQIGPAHRLGAQADGNFVLAAGALDVDAEKGKAYAQSLGVSAQRSYANWQDMLEGEKNHPDRLDLI
TVATPNSTHFEITKAFLEAGFNVLCEKPMTMTVDQGEEIVRVAKASGKICAVNYCYSAYPMVRQMRQMVAAGEIGKVRLI
VTNFSHGHHGDATDADNPRVRWRYDPAMAGVSGQFADCGIHALHMASFIAGDEVRSLSADFASTIDSRVLEDDAMVNFRM
EGGTVGRLWSSSVAIGRQHGFDIQVFGETGGMRWASEQPNQVFYTPVGGRTQIMEKGEAGLSDEAARLSRVAIAHPEGFP
LAVANIYVDLAAAIRGQRRDSLPTAEDGLRSMAAVYAAVDSAVQDGKWVDARPPSLR
>Mature_376_residues
TRLNWGMIGGGEGSQIGPAHRLGAQADGNFVLAAGALDVDAEKGKAYAQSLGVSAQRSYANWQDMLEGEKNHPDRLDLIT
VATPNSTHFEITKAFLEAGFNVLCEKPMTMTVDQGEEIVRVAKASGKICAVNYCYSAYPMVRQMRQMVAAGEIGKVRLIV
TNFSHGHHGDATDADNPRVRWRYDPAMAGVSGQFADCGIHALHMASFIAGDEVRSLSADFASTIDSRVLEDDAMVNFRME
GGTVGRLWSSSVAIGRQHGFDIQVFGETGGMRWASEQPNQVFYTPVGGRTQIMEKGEAGLSDEAARLSRVAIAHPEGFPL
AVANIYVDLAAAIRGQRRDSLPTAEDGLRSMAAVYAAVDSAVQDGKWVDARPPSLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=151, Percent_Identity=32.4503311258278, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI1787574, Length=266, Percent_Identity=24.812030075188, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI145693182, Length=305, Percent_Identity=23.9344262295082, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24581117, Length=176, Percent_Identity=23.2954545454545, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40623; Mature: 40492

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLNWGMIGGGEGSQIGPAHRLGAQADGNFVLAAGALDVDAEKGKAYAQSLGVSAQRSY
CCEECCEEEECCCCCCCCCHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHH
ANWQDMLEGEKNHPDRLDLITVATPNSTHFEITKAFLEAGFNVLCEKPMTMTVDQGEEIV
CCHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCEEEECCCHHHH
RVAKASGKICAVNYCYSAYPMVRQMRQMVAAGEIGKVRLIVTNFSHGHHGDATDADNPRV
HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEE
RWRYDPAMAGVSGQFADCGIHALHMASFIAGDEVRSLSADFASTIDSRVLEDDAMVNFRM
EEEECHHHCCCCCCCHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
EGGTVGRLWSSSVAIGRQHGFDIQVFGETGGMRWASEQPNQVFYTPVGGRTQIMEKGEAG
CCCCEEHHHCCCEEEHHCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCC
LSDEAARLSRVAIAHPEGFPLAVANIYVDLAAAIRGQRRDSLPTAEDGLRSMAAVYAAVD
CCHHHHHHHHEEEECCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
SAVQDGKWVDARPPSLR
HHHCCCCEECCCCCCCC
>Mature Secondary Structure 
TRLNWGMIGGGEGSQIGPAHRLGAQADGNFVLAAGALDVDAEKGKAYAQSLGVSAQRSY
CEECCEEEECCCCCCCCCHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHH
ANWQDMLEGEKNHPDRLDLITVATPNSTHFEITKAFLEAGFNVLCEKPMTMTVDQGEEIV
CCHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCEEEECCCHHHH
RVAKASGKICAVNYCYSAYPMVRQMRQMVAAGEIGKVRLIVTNFSHGHHGDATDADNPRV
HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEE
RWRYDPAMAGVSGQFADCGIHALHMASFIAGDEVRSLSADFASTIDSRVLEDDAMVNFRM
EEEECHHHCCCCCCCHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
EGGTVGRLWSSSVAIGRQHGFDIQVFGETGGMRWASEQPNQVFYTPVGGRTQIMEKGEAG
CCCCEEHHHCCCEEEHHCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCC
LSDEAARLSRVAIAHPEGFPLAVANIYVDLAAAIRGQRRDSLPTAEDGLRSMAAVYAAVD
CCHHHHHHHHEEEECCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
SAVQDGKWVDARPPSLR
HHHCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]