Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is crtC [H]

Identifier: 110677530

GI number: 110677530

Start: 116012

End: 117031

Strand: Direct

Name: crtC [H]

Synonym: RD1_0116

Alternate gene names: 110677530

Gene position: 116012-117031 (Clockwise)

Preceding gene: 110677529

Following gene: 110677531

Centisome position: 2.81

GC content: 64.71

Gene sequence:

>1020_bases
ATGGCTCGCGGGGGGCGGCACCCATCCGGGGGCGGGGGTCCCGATGGCGACACTCTCCGCCCGGCACGCGGCAGAGGCGA
TCTTGCGCGCCCAAACTTCAACGTCGCTGTCGGCCCCAACGGCTACGCCTGGTGGTATGTCGACGGGCTGAGCGATTGCG
GCAGCCGCGCGGTCTCCGTCATCGGGTTTATCGGATCGGTGTTTTCGCCGTGGTATCGTTGGTCGGGGCGCAAATGCCCG
CAGGATCACGTCTGCATCAATGTCGCCACCTACGGGCCCGGCGGACGGTTCACCATGACGGACCGGGGGCAAAGCGCGCT
GCGCCAGACCGCCTCCCGGCTGCAGGTTGGTCCGTCGATGATGCGCTGGGATGGCAATGATCTGGTTATCGAAATCAACG
AGGTGTCCAGCCCGCCGCTGATCAACCGCATCAGAGGCGAAATCCGCGTCACCCCTTCGGCCATCACCAATGTCGAACTG
CCCCTGACCCCGGATGGCGCCCACGTCTGGCGCCCCTTCGCGCCCCGCGCACGCATCAGCGTCAACATCGACCGCCCCGG
CTGGCAATGGCAGGGCGAGGGCTATTTCGACGCGAATTTCGGGTCCCGCGCGCTGGAAGAAGATTTCAGCTACTGGACAT
GGGGCCGCTTTCCGACCTCGGGCGGTGCCACCTGTTTCTACGACGCGACGCGTCTTGATGGTACGGAACTGTCGGCAGGC
TTCGCCTTTGATCATGACGGAACCGCGCGCAAGATCGAGATGCCCCCGAAAACCGGGTTTCGCCGCACGCTCTGGGCGGT
CAAACGCGAAACGCGCAGCGATGCAGGCTACAAACCCCATCAGGTGATGAGCATGCTCGACGCTCCGTTTTACTCCCGCT
CTGCCGTACGCACCAGGATCGACGGCGAGGAAACAACCGGCGTGCACGAAGCGCTTGATCTGACCCGGTTCCGATCGCCG
CTCTTGAAACCCATGCTTGCCGTGCGCGTGCCGCGGCGGAAAAACTGGAGCTGGGACTGA

Upstream 100 bases:

>100_bases
TGCTCTTTCCCGAAACGCTCGGCGCGCTTTACGGCCAGACGCCGCACGGGCTGACAGCGGCACTCCAGCGCCCGACAGCG
CAGACGCCGATTGCGGGACT

Downstream 100 bases:

>100_bases
CCGACCGCCCTTCGGGGCAAGACAGGCGTTCGGTAGTGCTGGAAACTCTCAGGTTGCGCTCTTAACATAATATTTCTACT
CAGGGTGTATTGGATCGTTT

Product: hydroxyneurosporene dehydrogenase

Products: NA

Alternate protein names: Hydroxyneurosporene synthase [H]

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MARGGRHPSGGGGPDGDTLRPARGRGDLARPNFNVAVGPNGYAWWYVDGLSDCGSRAVSVIGFIGSVFSPWYRWSGRKCP
QDHVCINVATYGPGGRFTMTDRGQSALRQTASRLQVGPSMMRWDGNDLVIEINEVSSPPLINRIRGEIRVTPSAITNVEL
PLTPDGAHVWRPFAPRARISVNIDRPGWQWQGEGYFDANFGSRALEEDFSYWTWGRFPTSGGATCFYDATRLDGTELSAG
FAFDHDGTARKIEMPPKTGFRRTLWAVKRETRSDAGYKPHQVMSMLDAPFYSRSAVRTRIDGEETTGVHEALDLTRFRSP
LLKPMLAVRVPRRKNWSWD

Sequences:

>Translated_339_residues
MARGGRHPSGGGGPDGDTLRPARGRGDLARPNFNVAVGPNGYAWWYVDGLSDCGSRAVSVIGFIGSVFSPWYRWSGRKCP
QDHVCINVATYGPGGRFTMTDRGQSALRQTASRLQVGPSMMRWDGNDLVIEINEVSSPPLINRIRGEIRVTPSAITNVEL
PLTPDGAHVWRPFAPRARISVNIDRPGWQWQGEGYFDANFGSRALEEDFSYWTWGRFPTSGGATCFYDATRLDGTELSAG
FAFDHDGTARKIEMPPKTGFRRTLWAVKRETRSDAGYKPHQVMSMLDAPFYSRSAVRTRIDGEETTGVHEALDLTRFRSP
LLKPMLAVRVPRRKNWSWD
>Mature_338_residues
ARGGRHPSGGGGPDGDTLRPARGRGDLARPNFNVAVGPNGYAWWYVDGLSDCGSRAVSVIGFIGSVFSPWYRWSGRKCPQ
DHVCINVATYGPGGRFTMTDRGQSALRQTASRLQVGPSMMRWDGNDLVIEINEVSSPPLINRIRGEIRVTPSAITNVELP
LTPDGAHVWRPFAPRARISVNIDRPGWQWQGEGYFDANFGSRALEEDFSYWTWGRFPTSGGATCFYDATRLDGTELSAGF
AFDHDGTARKIEMPPKTGFRRTLWAVKRETRSDAGYKPHQVMSMLDAPFYSRSAVRTRIDGEETTGVHEALDLTRFRSPL
LKPMLAVRVPRRKNWSWD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010791 [H]

Pfam domain/function: PF07143 CrtC [H]

EC number: NA

Molecular weight: Translated: 37799; Mature: 37668

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGGRHPSGGGGPDGDTLRPARGRGDLARPNFNVAVGPNGYAWWYVDGLSDCGSRAVSV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHHHH
IGFIGSVFSPWYRWSGRKCPQDHVCINVATYGPGGRFTMTDRGQSALRQTASRLQVGPSM
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCHH
MRWDGNDLVIEINEVSSPPLINRIRGEIRVTPSAITNVELPLTPDGAHVWRPFAPRARIS
EEECCCEEEEEEECCCCCHHHHHCCCEEEECCHHHCEEEEECCCCCCCEECCCCCCCEEE
VNIDRPGWQWQGEGYFDANFGSRALEEDFSYWTWGRFPTSGGATCFYDATRLDGTELSAG
EEECCCCCEECCCEEEECCCCCHHHHHCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCC
FAFDHDGTARKIEMPPKTGFRRTLWAVKRETRSDAGYKPHQVMSMLDAPFYSRSAVRTRI
EEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHEEC
DGEETTGVHEALDLTRFRSPLLKPMLAVRVPRRKNWSWD
CCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ARGGRHPSGGGGPDGDTLRPARGRGDLARPNFNVAVGPNGYAWWYVDGLSDCGSRAVSV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHHHH
IGFIGSVFSPWYRWSGRKCPQDHVCINVATYGPGGRFTMTDRGQSALRQTASRLQVGPSM
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCHH
MRWDGNDLVIEINEVSSPPLINRIRGEIRVTPSAITNVELPLTPDGAHVWRPFAPRARIS
EEECCCEEEEEEECCCCCHHHHHCCCEEEECCHHHCEEEEECCCCCCCEECCCCCCCEEE
VNIDRPGWQWQGEGYFDANFGSRALEEDFSYWTWGRFPTSGGATCFYDATRLDGTELSAG
EEECCCCCEECCCEEEECCCCCHHHHHCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCC
FAFDHDGTARKIEMPPKTGFRRTLWAVKRETRSDAGYKPHQVMSMLDAPFYSRSAVRTRI
EEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHEEC
DGEETTGVHEALDLTRFRSPLLKPMLAVRVPRRKNWSWD
CCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721699; 1612412 [H]