Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110677509

Identifier: 110677509

GI number: 110677509

Start: 96769

End: 97056

Strand: Direct

Name: 110677509

Synonym: RD1_0095

Alternate gene names: NA

Gene position: 96769-97056 (Clockwise)

Preceding gene: 110677508

Following gene: 110677511

Centisome position: 2.34

GC content: 56.94

Gene sequence:

>288_bases
ATGAGCGAGTCGGTAAATCGAGACGCTAACGACTCAGATGCCCGCAAGGGTGGAGATAGTGCGCAATGGGAGAGAGCGAT
GACTGATCTTGAAATTCAGGCGAGTAAACTTGCTGACCGGGCTGAAAAAGCGACACATGCCGAACGCATGATGCTGCAGC
CCCAGATTGACCGCGTTCTGACCACGCTCGCGATGCGCGGTGCCCCTGTGAGCGGGCGTCTGCGCCGCATCAACAACACG
CTGAAGGACGAAGCGTTGGACGATATGTTCGACAACATGCCGGTCTGA

Upstream 100 bases:

>100_bases
TTTACTGGTGAAAAACCAAGCAAACGCGGCAAAATGCCTGTTATTTCCTCAACTATGGCGTGAATACTGTCGTCTTCTGT
GATACAATTACGACTAAAGT

Downstream 100 bases:

>100_bases
GGCGCGTCAAACACATGTAACCCGCCCCTGCTGCCCGTCCGATACGGCGGCGCGTTTTGAACTGCGACAACTGGACGTCA
ATGGTCCAGACGCAAACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSESVNRDANDSDARKGGDSAQWERAMTDLEIQASKLADRAEKATHAERMMLQPQIDRVLTTLAMRGAPVSGRLRRINNT
LKDEALDDMFDNMPV

Sequences:

>Translated_95_residues
MSESVNRDANDSDARKGGDSAQWERAMTDLEIQASKLADRAEKATHAERMMLQPQIDRVLTTLAMRGAPVSGRLRRINNT
LKDEALDDMFDNMPV
>Mature_94_residues
SESVNRDANDSDARKGGDSAQWERAMTDLEIQASKLADRAEKATHAERMMLQPQIDRVLTTLAMRGAPVSGRLRRINNTL
KDEALDDMFDNMPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10647; Mature: 10516

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESVNRDANDSDARKGGDSAQWERAMTDLEIQASKLADRAEKATHAERMMLQPQIDRVL
CCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTLAMRGAPVSGRLRRINNTLKDEALDDMFDNMPV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SESVNRDANDSDARKGGDSAQWERAMTDLEIQASKLADRAEKATHAERMMLQPQIDRVL
CCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTLAMRGAPVSGRLRRINNTLKDEALDDMFDNMPV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA