| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110677511
Identifier: 110677511
GI number: 110677511
Start: 98445
End: 98945
Strand: Direct
Name: 110677511
Synonym: RD1_0097
Alternate gene names: NA
Gene position: 98445-98945 (Clockwise)
Preceding gene: 110677509
Following gene: 110677512
Centisome position: 2.38
GC content: 58.48
Gene sequence:
>501_bases ATGCGGGATGACATCATCCTGAGTCCCATTACGCAGACACAACACCGCGAGGATGCGCTGGATCTTGCCATGCGCGCCAC CGATTATGCCACGCTTGAGGTGGGGCACGCCCCTGATGGCGCGTATATACGTGATTTCTTTACCGCTGTGCCACCGGGGC TCGGACCGGATTGCCTGATGCATTTCGGGGTCATGGAAGGCCCGGCGATGGTGGGCATGATCTGCATCGCCGAAGGGTAT GAATTTCCCGATGACTGGTGGATCGGGCTGGTGTTGCTTGACCCTGCGTTTCGGGGACAGGGGGTTGGGCACAAAGTCGT CTCAGACATCAAGACACGGGCGCGCAACCGGCGCATCAATCTGCTCAAGCTGGCGGTTTTGGCAGCAAATCCCCGCGCGC TTAAATTCTGGCATCGCGAAGGGTTTACCCATCACCGCGATGCCCCCGCGACACCACAAAGCGATGGACATGACAGGATC GTGCTGAAATACCAGTTGTAG
Upstream 100 bases:
>100_bases GCAAAACCATCGTTTACCAAACTGAAACGTTAATCGGCGACAAAGACGGCCAAAGCTGCGTCACACCCCTTAGAACCGGC AGCCAAGAAAGGCGGGTCCG
Downstream 100 bases:
>100_bases CTGGAGGAGTATTTCATGCGACTTTCTGGAAAAACCGCCATTATCACCGGGGGCGCATCCGGGTTTGGCGCAGGTATTGC GCGTAGATTCATCGCAGAGG
Product: acetyltransferase, GNAT family protein, putative
Products: NA
Alternate protein names: Acetyltransferase GNAT Family; Acetyltransferase GNAT Family Protein; Acetyltransferase
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MRDDIILSPITQTQHREDALDLAMRATDYATLEVGHAPDGAYIRDFFTAVPPGLGPDCLMHFGVMEGPAMVGMICIAEGY EFPDDWWIGLVLLDPAFRGQGVGHKVVSDIKTRARNRRINLLKLAVLAANPRALKFWHREGFTHHRDAPATPQSDGHDRI VLKYQL
Sequences:
>Translated_166_residues MRDDIILSPITQTQHREDALDLAMRATDYATLEVGHAPDGAYIRDFFTAVPPGLGPDCLMHFGVMEGPAMVGMICIAEGY EFPDDWWIGLVLLDPAFRGQGVGHKVVSDIKTRARNRRINLLKLAVLAANPRALKFWHREGFTHHRDAPATPQSDGHDRI VLKYQL >Mature_166_residues MRDDIILSPITQTQHREDALDLAMRATDYATLEVGHAPDGAYIRDFFTAVPPGLGPDCLMHFGVMEGPAMVGMICIAEGY EFPDDWWIGLVLLDPAFRGQGVGHKVVSDIKTRARNRRINLLKLAVLAANPRALKFWHREGFTHHRDAPATPQSDGHDRI VLKYQL
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18585; Mature: 18585
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDDIILSPITQTQHREDALDLAMRATDYATLEVGHAPDGAYIRDFFTAVPPGLGPDCLM CCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHH HFGVMEGPAMVGMICIAEGYEFPDDWWIGLVLLDPAFRGQGVGHKVVSDIKTRARNRRIN HHCCCCCCHHEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCE LLKLAVLAANPRALKFWHREGFTHHRDAPATPQSDGHDRIVLKYQL EEEEEEEECCCHHEEEHHHCCCCCCCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MRDDIILSPITQTQHREDALDLAMRATDYATLEVGHAPDGAYIRDFFTAVPPGLGPDCLM CCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHH HFGVMEGPAMVGMICIAEGYEFPDDWWIGLVLLDPAFRGQGVGHKVVSDIKTRARNRRIN HHCCCCCCHHEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCE LLKLAVLAANPRALKFWHREGFTHHRDAPATPQSDGHDRIVLKYQL EEEEEEEECCCHHEEEHHHCCCCCCCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA