Click here to switch to the map view.

The map label for this gene is pqiA [H]

Identifier: 110677490

GI number: 110677490

Start: 78658

End: 79296

Strand: Direct

Name: pqiA [H]

Synonym: RD1_0075

Alternate gene names: 110677490

Gene position: 78658-79296 (Clockwise)

Preceding gene: 110677485

Following gene: 110677491

Centisome position: 1.9

GC content: 57.43

Gene sequence:

>639_bases
ATGACAGATGCAACCAAGCCAGCGCCCCGGACGGACCTTATCATCTGTCCAAATTGTGATGCCGTTTTCTCCCTTGCCCG
ACCCGGGCATGGCGAAAAAGCTGTTTGCAGCCGATGCGAAACCGTTCTGATCACGCCGCGCCGCAATGCCGGGCTTCAGA
TCATCGCTTTGTCCCTGTCGATCGTGATCCTGATTTCAACAGCGGCGGTATTTCCCTTCCTGTCAGTGGATGCCATCGGG
ATCAAGAATTCGGTCTCGATCCTCGAAACGGCTCTGGTGTTCAGCGATGGGCCCCTGGCCGTGCTCTCCCTCACAACGGC
GGCATTGATCCTGTTTATTCCGCTGCTGCGGGTCATGCTGTGCCTTTATGTCATCGTGCCGCTGGTCCGGGATCGCGCGC
CCGCACCCTATTCAGCCGATGCCTTCCGGGTGGCCGAAGCCCTGCGGCCCTGGTCCATGGCGGAGGTTTTCGCGATTGGC
TGTGCCGTTGCGCTCATCAAGGTCAGCGCTTTGGTTCATGTGACTTTCGGGCCTGCTTTCTGGCTTTTCAGCGTGCTGGT
CATGCTTGTGGTTGTGCAGGAAAACATAATCTGTAGATGGTCCGTATGGAACGCATTGAGCCGACCCAGAAGATCGTAA

Upstream 100 bases:

>100_bases
GCAGGTGCTCCGATGGAATTGTGCTCATTTGTGCATGCCCGACCCATAGCAACGAAAACAGGCGTTTTCGTGCGGATGTA
AACGCGCTATCTTGCGCCCA

Downstream 100 bases:

>100_bases
CCGCGCGCGAGTTAGGGCTGGTGGGCTGCGTTCGCTGTCATCAGGTCTGGCCTGAGGACACAGCACGATGCGGGCGCTGC
GGGCACGCATTGAAAAGCCG

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTDATKPAPRTDLIICPNCDAVFSLARPGHGEKAVCSRCETVLITPRRNAGLQIIALSLSIVILISTAAVFPFLSVDAIG
IKNSVSILETALVFSDGPLAVLSLTTAALILFIPLLRVMLCLYVIVPLVRDRAPAPYSADAFRVAEALRPWSMAEVFAIG
CAVALIKVSALVHVTFGPAFWLFSVLVMLVVVQENIICRWSVWNALSRPRRS

Sequences:

>Translated_212_residues
MTDATKPAPRTDLIICPNCDAVFSLARPGHGEKAVCSRCETVLITPRRNAGLQIIALSLSIVILISTAAVFPFLSVDAIG
IKNSVSILETALVFSDGPLAVLSLTTAALILFIPLLRVMLCLYVIVPLVRDRAPAPYSADAFRVAEALRPWSMAEVFAIG
CAVALIKVSALVHVTFGPAFWLFSVLVMLVVVQENIICRWSVWNALSRPRRS
>Mature_211_residues
TDATKPAPRTDLIICPNCDAVFSLARPGHGEKAVCSRCETVLITPRRNAGLQIIALSLSIVILISTAAVFPFLSVDAIGI
KNSVSILETALVFSDGPLAVLSLTTAALILFIPLLRVMLCLYVIVPLVRDRAPAPYSADAFRVAEALRPWSMAEVFAIGC
AVALIKVSALVHVTFGPAFWLFSVLVMLVVVQENIICRWSVWNALSRPRRS

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1787183, Length=177, Percent_Identity=31.0734463276836, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788137, Length=184, Percent_Identity=23.9130434782609, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 22929; Mature: 22797

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDATKPAPRTDLIICPNCDAVFSLARPGHGEKAVCSRCETVLITPRRNAGLQIIALSLS
CCCCCCCCCCCCEEECCCCHHHHHHCCCCCCCHHHHHCCCEEEEECCCCCCEEEHHHHHH
IVILISTAAVFPFLSVDAIGIKNSVSILETALVFSDGPLAVLSLTTAALILFIPLLRVML
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
CLYVIVPLVRDRAPAPYSADAFRVAEALRPWSMAEVFAIGCAVALIKVSALVHVTFGPAF
HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
WLFSVLVMLVVVQENIICRWSVWNALSRPRRS
HHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCC
>Mature Secondary Structure 
TDATKPAPRTDLIICPNCDAVFSLARPGHGEKAVCSRCETVLITPRRNAGLQIIALSLS
CCCCCCCCCCCEEECCCCHHHHHHCCCCCCCHHHHHCCCEEEEECCCCCCEEEHHHHHH
IVILISTAAVFPFLSVDAIGIKNSVSILETALVFSDGPLAVLSLTTAALILFIPLLRVML
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
CLYVIVPLVRDRAPAPYSADAFRVAEALRPWSMAEVFAIGCAVALIKVSALVHVTFGPAF
HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
WLFSVLVMLVVVQENIICRWSVWNALSRPRRS
HHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]