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The map label for this gene is 110677423

Identifier: 110677423

GI number: 110677423

Start: 2948

End: 3556

Strand: Direct

Name: 110677423

Synonym: RD1_0004

Alternate gene names: NA

Gene position: 2948-3556 (Clockwise)

Preceding gene: 110677422

Following gene: 110677424

Centisome position: 0.07

GC content: 57.31

Gene sequence:

>609_bases
ATGTCGAAATTTCAGTTTCCGAAAAGCATCAGAAGCCGCCCTGTCTATGGGACACTGACGCCGCGTCGGGGCAAATCACA
CCTTATGATAGCGGATGCGGAAGGGGCAGAGGCCTTGCTGGATCTGGCCCAGCAAGACGCGGAAGTCTTTCGCACCGCCC
ATCTGATCTATATTCCCAAAGCCACCGGCGAAACCTATGTGGAAAAACTCAAGGCGCTGAAGCCTGCGCAATTCTATGTC
GGGCCAAGCTATGAGGCCTCGGTGTCGCGCATCCGCCGCGTTCTGTCGGATGCCCACATGGGTCTGCAGGTTTACCTGAC
CGGCACCGAGGGCCTGATGGGTCAGGCGATGAACGAAGCCATGACCGCAGGCATTCCGCATCAGGCAATCCAGACCGAGC
ATCGTGGCTCTGTCGCGCGGCGCATGCAGTGCGTGCACTGCAAGGGCATCACCGAGGATGTGATGACCGACCCGTTCCAA
TGTACCCATTGTGGATTGCACCTTTTCGTTCGGGATCATTATTCACGCAGACTTGCCGCCTTTCAGGGCGTGTGCATTGA
TGCCGAAGATCCCGGAAACATCCCCGAACCCGTGGAGCTGTACAAATGA

Upstream 100 bases:

>100_bases
GCCATCCGCACAGCCAAGGGCTGATCTGGATGTACATTGAAAGGCGCCTTCCAAGCGGGCGCCTTTTTCGCCACCGTAGA
TCGAAAGGAGAGACGGCAGC

Downstream 100 bases:

>100_bases
GCGCCGCCCCCCAGAAAGCCAAAGCCGGTGCCGAAAAGATCGAGGTCGAAGTCAGCGCCATTGTCCCCGTCAACGAACTG
GTCTCACGGTTCGAATTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSKFQFPKSIRSRPVYGTLTPRRGKSHLMIADAEGAEALLDLAQQDAEVFRTAHLIYIPKATGETYVEKLKALKPAQFYV
GPSYEASVSRIRRVLSDAHMGLQVYLTGTEGLMGQAMNEAMTAGIPHQAIQTEHRGSVARRMQCVHCKGITEDVMTDPFQ
CTHCGLHLFVRDHYSRRLAAFQGVCIDAEDPGNIPEPVELYK

Sequences:

>Translated_202_residues
MSKFQFPKSIRSRPVYGTLTPRRGKSHLMIADAEGAEALLDLAQQDAEVFRTAHLIYIPKATGETYVEKLKALKPAQFYV
GPSYEASVSRIRRVLSDAHMGLQVYLTGTEGLMGQAMNEAMTAGIPHQAIQTEHRGSVARRMQCVHCKGITEDVMTDPFQ
CTHCGLHLFVRDHYSRRLAAFQGVCIDAEDPGNIPEPVELYK
>Mature_201_residues
SKFQFPKSIRSRPVYGTLTPRRGKSHLMIADAEGAEALLDLAQQDAEVFRTAHLIYIPKATGETYVEKLKALKPAQFYVG
PSYEASVSRIRRVLSDAHMGLQVYLTGTEGLMGQAMNEAMTAGIPHQAIQTEHRGSVARRMQCVHCKGITEDVMTDPFQC
THCGLHLFVRDHYSRRLAAFQGVCIDAEDPGNIPEPVELYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22506; Mature: 22375

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFQFPKSIRSRPVYGTLTPRRGKSHLMIADAEGAEALLDLAQQDAEVFRTAHLIYIPK
CCCCCCCHHHHCCCCEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEEC
ATGETYVEKLKALKPAQFYVGPSYEASVSRIRRVLSDAHMGLQVYLTGTEGLMGQAMNEA
CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH
MTAGIPHQAIQTEHRGSVARRMQCVHCKGITEDVMTDPFQCTHCGLHLFVRDHYSRRLAA
HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FQGVCIDAEDPGNIPEPVELYK
HCCEEECCCCCCCCCCCHHHCC
>Mature Secondary Structure 
SKFQFPKSIRSRPVYGTLTPRRGKSHLMIADAEGAEALLDLAQQDAEVFRTAHLIYIPK
CCCCCCHHHHCCCCEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEEC
ATGETYVEKLKALKPAQFYVGPSYEASVSRIRRVLSDAHMGLQVYLTGTEGLMGQAMNEA
CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH
MTAGIPHQAIQTEHRGSVARRMQCVHCKGITEDVMTDPFQCTHCGLHLFVRDHYSRRLAA
HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FQGVCIDAEDPGNIPEPVELYK
HCCEEECCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA