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The map label for this gene is ssaN [H]

Identifier: 108813561

GI number: 108813561

Start: 3876094

End: 3877440

Strand: Reverse

Name: ssaN [H]

Synonym: YPN_3401

Alternate gene names: 108813561

Gene position: 3877440-3876094 (Counterclockwise)

Preceding gene: 108813562

Following gene: 108813560

Centisome position: 85.51

GC content: 57.39

Gene sequence:

>1347_bases
ATGAACTTGATGAAACTGCCTGATATCGCGCGGTTAACCCCCCGCCTGCAACAACAACTCACGCGACCGTCGGCACCACC
GGAGGGCTTGCGTTACCGTGGGCCGATTGTGGAGATTGGGCCGACCTTGTTACGAGCCAGCCTACCCAATGTGGCGCAGG
GTGAATTATGCCGCATTGAACCGCAAGGGATGTTAGCTGAAGTGGTATCGATTGAGCAGGAAATGGCCTTGTTATCCCCC
TTTGCCTCTTCAGATGGCCTGCGTTGTGGGCAATGGGTGACGCCACTTGGACACATGCACCGGGTACAGGTGGGGGCTGA
TTTGGCCGGGCGGATCTTGGATGGCCTAGGTGCTCCGATAGACGGCGGCCCCCCGCTGACGGGGCAGTGGCGTGAACTGG
ATTGCCCCCCGCCTAGCCCATTAACCCGCCAGCCGGTAGAGCAAATGCTGACCACCGGAATCCGCGCGATTGATGGGATA
TTGAGCTGTGGCGAGGGCCAGCGTATTGGTATTTTTGCCGCCGCTGGCGTTGGGAAAAGTACTTTATTGAGCATGTTATG
TGCTGATAGTGCGGCCGATGTGATGGTGCTGGCACTGATTGGTGAGCGTGGGCGGGAGGTGCGCGAATTTCTTGAACAGG
TGCTGACTCCAGAGGCGCGTGCGCGCACCGTGGTGGTGGTGGCGACCTCTGACCGGCCAGCATTGGAGCGGTTGAAGGGG
CTGTCTACTGCCACCACGGTGGCGGAGTATTTTCGCGAACGTGGATTGAAGGTGTTGTTACTGGCGGATTCACTGACCCG
CTATGCCCGTGCCGCCCGTGAAATTGGTCTGGCGGCAGGTGAGCCACCGGCTGCTGGCAGTTTCCCCCCAAGTGTTTTTG
CCAACTTACCCCGTCTGTTGGAGCGAACGGGTAACAGTGATCGCGGCAGCATTACGGCTTTTTATACCGTGCTGGTGGAG
GGAGATGACATGAATGAACCGGTGGCCGATGAAGTGCGTTCGCTGTTGGATGGGCACATCGTTTTATCACGACGGTTGGC
CGGTGCCGGGCATTATCCGGCGATTGATATTGCCGCCAGCGTCAGCCGTATCATGCCGCAAATCGTTAGTGCCGGGCAGT
TGGCGATGGCACAAAAACTACGGCGAATGCTGGCCTGTTATCAGGAGATCGAGCTGTTGGTGCAGATTGGTGAATATCAG
GCAGGAGAAGACCTACAGGCTGATGAAGCCTTACAACGCTATCCGGCAATATGCGCCTTTTTACAACAAGACCACAGCCT
AACGCGTGACCCAGATACTGCTCATCTTGATACCACTCTGGAACACCTGGCGCAGGTTGTCGGTTGA

Upstream 100 bases:

>100_bases
ATTATTGAGCGGGATCTCTTCGTGCTACCGGTACTTTCCTGGCAGGAACTGGGCGATGAAATGAATCTCAAGGTGGCGGG
CACCATTGAACTGATTGGCG

Downstream 100 bases:

>100_bases
ATCACTCGCAACAGCGGACGCTACAACGGCTATTGGCGCTACGGCAGCGGCAGGAACGGCGGTTGCGCCAGCAACTGGGA
CAACTGCGGCGTGAGCAGCA

Product: type III secretion system ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MNLMKLPDIARLTPRLQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLPNVAQGELCRIEPQGMLAEVVSIEQEMALLSP
FASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGPPLTGQWRELDCPPPSPLTRQPVEQMLTTGIRAIDGI
LSCGEGQRIGIFAAAGVGKSTLLSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKG
LSTATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSDRGSITAFYTVLVE
GDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQ
AGEDLQADEALQRYPAICAFLQQDHSLTRDPDTAHLDTTLEHLAQVVG

Sequences:

>Translated_448_residues
MNLMKLPDIARLTPRLQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLPNVAQGELCRIEPQGMLAEVVSIEQEMALLSP
FASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGPPLTGQWRELDCPPPSPLTRQPVEQMLTTGIRAIDGI
LSCGEGQRIGIFAAAGVGKSTLLSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKG
LSTATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSDRGSITAFYTVLVE
GDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQ
AGEDLQADEALQRYPAICAFLQQDHSLTRDPDTAHLDTTLEHLAQVVG
>Mature_448_residues
MNLMKLPDIARLTPRLQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLPNVAQGELCRIEPQGMLAEVVSIEQEMALLSP
FASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGPPLTGQWRELDCPPPSPLTRQPVEQMLTTGIRAIDGI
LSCGEGQRIGIFAAAGVGKSTLLSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKG
LSTATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSDRGSITAFYTVLVE
GDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQ
AGEDLQADEALQRYPAICAFLQQDHSLTRDPDTAHLDTTLEHLAQVVG

Specific function: Probable Catalytic Subunit Of A Protein Translocase For Flagellum-Specific Export, Or A Proton Translocase Involved In Local Circuits At The Flagellum. May Be Involved In A Specialized Protein Export Pathway That Proceeds Without Signal Peptide Cleavage.

COG id: COG1157

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=325, Percent_Identity=31.3846153846154, Blast_Score=155, Evalue=1e-37,
Organism=Homo sapiens, GI50345984, Length=381, Percent_Identity=28.6089238845144, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI4757810, Length=381, Percent_Identity=28.6089238845144, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI19913428, Length=374, Percent_Identity=26.7379679144385, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI19913426, Length=377, Percent_Identity=26.525198938992, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI19913424, Length=243, Percent_Identity=32.5102880658436, Blast_Score=112, Evalue=5e-25,
Organism=Escherichia coli, GI1788251, Length=386, Percent_Identity=48.1865284974093, Blast_Score=323, Evalue=1e-89,
Organism=Escherichia coli, GI1790170, Length=321, Percent_Identity=32.7102803738318, Blast_Score=152, Evalue=6e-38,
Organism=Escherichia coli, GI1790172, Length=389, Percent_Identity=29.8200514138817, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI1790217, Length=247, Percent_Identity=28.3400809716599, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25144756, Length=325, Percent_Identity=29.8461538461538, Blast_Score=146, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI71988080, Length=386, Percent_Identity=27.720207253886, Blast_Score=131, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI71988063, Length=386, Percent_Identity=27.720207253886, Blast_Score=131, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI17510931, Length=421, Percent_Identity=26.3657957244656, Blast_Score=131, Evalue=7e-31,
Organism=Caenorhabditis elegans, GI17570191, Length=388, Percent_Identity=25.7731958762887, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17565854, Length=245, Percent_Identity=31.8367346938775, Blast_Score=112, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI71988074, Length=299, Percent_Identity=28.7625418060201, Blast_Score=110, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6322581, Length=324, Percent_Identity=31.1728395061728, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6319370, Length=415, Percent_Identity=28.433734939759, Blast_Score=140, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6319603, Length=333, Percent_Identity=28.2282282282282, Blast_Score=135, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6320016, Length=227, Percent_Identity=30.8370044052863, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24638766, Length=325, Percent_Identity=31.0769230769231, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI28574560, Length=328, Percent_Identity=32.0121951219512, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI281361666, Length=346, Percent_Identity=27.1676300578035, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24646341, Length=346, Percent_Identity=27.1676300578035, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI17136796, Length=346, Percent_Identity=27.1676300578035, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24658560, Length=392, Percent_Identity=28.8265306122449, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24583992, Length=245, Percent_Identity=32.2448979591837, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24583988, Length=245, Percent_Identity=32.2448979591837, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24583986, Length=245, Percent_Identity=32.2448979591837, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24583984, Length=245, Percent_Identity=32.2448979591837, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI20129479, Length=315, Percent_Identity=28.2539682539683, Blast_Score=112, Evalue=4e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005714
- InterPro:   IPR013380 [H]

Pfam domain/function: PF00006 ATP-synt_ab [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 48245; Mature: 48245

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLMKLPDIARLTPRLQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLPNVAQGELCRIE
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCHHHHHHCCCCCCCCCEEEEC
PQGMLAEVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPI
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHCHHHHHHHHHHCCCCC
DGGPPLTGQWRELDCPPPSPLTRQPVEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHH
TLLSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKG
HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHC
LSTATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLL
CHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
ERTGNSDRGSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAAS
HHCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHH
VSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAF
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
LQQDHSLTRDPDTAHLDTTLEHLAQVVG
HHHCCCCCCCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNLMKLPDIARLTPRLQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLPNVAQGELCRIE
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCHHHHHHCCCCCCCCCEEEEC
PQGMLAEVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPI
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHCHHHHHHHHHHCCCCC
DGGPPLTGQWRELDCPPPSPLTRQPVEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHH
TLLSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKG
HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHC
LSTATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLL
CHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
ERTGNSDRGSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAAS
HHCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHH
VSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAF
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
LQQDHSLTRDPDTAHLDTTLEHLAQVVG
HHHCCCCCCCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]