| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
Click here to switch to the map view.
The map label for this gene is 108812969
Identifier: 108812969
GI number: 108812969
Start: 3165697
End: 3166011
Strand: Reverse
Name: 108812969
Synonym: YPN_2809
Alternate gene names: NA
Gene position: 3166011-3165697 (Counterclockwise)
Preceding gene: 108812970
Following gene: 108812968
Centisome position: 69.82
GC content: 53.97
Gene sequence:
>315_bases ATGCAGCAAATGGTAATGGGGGTAATGGGGGTGATGGATCTAATAGTGGTAATGGTGGAAACGGAGGAAATGCAGGAACC GACAGTAATGGAAACGGCGGGCATGGTGGTTCGGGAGGTAATAACGGGGGAAATGGGGGACGAGGGGGAAATGGAGATGG TTCTGGAAATGGTGGTCGCGGTGGTGATGCTGGATGGGGAGGGGGAAGTGGAGGATCAGGTGGTCGAGGTGGCGCTAGCG GCCAAGATGGTTCTTCCGGTACGAGTACGGCCAGATAAACGCCGTCTCATTCCAGCAAACTATCCATTCCATTAA
Upstream 100 bases:
>100_bases AATATGAGAATAGTTAATTACGCCTTAATGTCGTCTCTATTTTCCATGTGTTCTTTACCACTCATAACAACTATTTTATC TACAGTGCCTACAGCTGTAT
Downstream 100 bases:
>100_bases TCGGCATTGTGTTTGAAGCCGCCAACAGAGCGGTTAATGAGATGGTCACTCCCACCTTGTGAGCGGTAAGCTGACAGGGT GTTTTCTTTGGAAGGGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MQQMVMGVMGVMDLIVVMVETEEMQEPTVMETAGMVVREVITGEMGDEGEMEMVLEMVVAVVMLDGEGEVEDQVVEVALA AKMVLPVRVRPDKRRLIPANYPFH
Sequences:
>Translated_104_residues MQQMVMGVMGVMDLIVVMVETEEMQEPTVMETAGMVVREVITGEMGDEGEMEMVLEMVVAVVMLDGEGEVEDQVVEVALA AKMVLPVRVRPDKRRLIPANYPFH >Mature_104_residues MQQMVMGVMGVMDLIVVMVETEEMQEPTVMETAGMVVREVITGEMGDEGEMEMVLEMVVAVVMLDGEGEVEDQVVEVALA AKMVLPVRVRPDKRRLIPANYPFH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11582; Mature: 11582
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 14.4 %Met (Translated Protein) 14.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 14.4 %Met (Mature Protein) 14.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQMVMGVMGVMDLIVVMVETEEMQEPTVMETAGMVVREVITGEMGDEGEMEMVLEMVVA CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VVMLDGEGEVEDQVVEVALAAKMVLPVRVRPDKRRLIPANYPFH HHHCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure MQQMVMGVMGVMDLIVVMVETEEMQEPTVMETAGMVVREVITGEMGDEGEMEMVLEMVVA CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VVMLDGEGEVEDQVVEVALAAKMVLPVRVRPDKRRLIPANYPFH HHHCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA