| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812970
Identifier: 108812970
GI number: 108812970
Start: 3166129
End: 3166683
Strand: Reverse
Name: 108812970
Synonym: YPN_2810
Alternate gene names: NA
Gene position: 3166683-3166129 (Counterclockwise)
Preceding gene: 108812971
Following gene: 108812969
Centisome position: 69.83
GC content: 49.01
Gene sequence:
>555_bases ATGGTAAGTCAGGTGAGAATGGGCTTGATGGATTACCAGACTCAAATTGTAAAAATGGAGGGAACGGCGGTCAAGGCACT CTACATATTAATAATGGCTCGGGTGGAAATGGGGGGAATGGCGCAGCAAATAATGCTTCGGGTGGAAATGGCGGTAATGG CGGCAATGGTGCTACCAATGGTGGCTCCGGCGGGAATGGAGGGAATGGATAAATACTTATTAAGTAAATTAATATTCACT GTTCTATTAGGCATCTCTTTATCTTCAGAAGCAGCATTAAATATATATTCCCATAACTTGATAAAAACGGTTGGGGATGG TGGAGCCGGAGGAAATGGGGGAAATGGAGTAGGTGGAGGAAACGGAGGTCATGGCGGCAACGCAGGCTCTGGTCAAAACT CTCATGGTGGAGCCGGAGGAAATGGGGGCAACTCTGGTGGACGCGGCTCCTCAGGTGGAAATGGTGGGGGTGGTGGTAAT GGAGGTAGTGGCAGCAATTCTTCAGGAGGACAAGGTGGGGATGGGGGTAATGCGGGTAACAGTGGTCTTACTTAA
Upstream 100 bases:
>100_bases AGTTCGAAAAAATTATTATTGTTAAGTTTATCCTGTTTATTACCCTTACCAGCATCAGCTATGCAGAATATCGTCAAATC GATTAGCTGCTCTGCATTGG
Downstream 100 bases:
>100_bases TAATAAAGTCAGAGGTAAATATGAGAATAGTTAATTACGCCTTAATGTCGTCTCTATTTTCCATGTGTTCTTTACCACTC ATAACAACTATTTTATCTAC
Product: molecular chaperone
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MVSQVRMGLMDYQTQIVKMEGTAVKALYILIMARVEMGGMAQQIMLRVEMAVMAAMVLPMVAPAGMEGMDKYLLSKLIFT VLLGISLSSEAALNIYSHNLIKTVGDGGAGGNGGNGVGGGNGGHGGNAGSGQNSHGGAGGNGGNSGGRGSSGGNGGGGGN GGSGSNSSGGQGGDGGNAGNSGLT
Sequences:
>Translated_184_residues MVSQVRMGLMDYQTQIVKMEGTAVKALYILIMARVEMGGMAQQIMLRVEMAVMAAMVLPMVAPAGMEGMDKYLLSKLIFT VLLGISLSSEAALNIYSHNLIKTVGDGGAGGNGGNGVGGGNGGHGGNAGSGQNSHGGAGGNGGNSGGRGSSGGNGGGGGN GGSGSNSSGGQGGDGGNAGNSGLT >Mature_184_residues MVSQVRMGLMDYQTQIVKMEGTAVKALYILIMARVEMGGMAQQIMLRVEMAVMAAMVLPMVAPAGMEGMDKYLLSKLIFT VLLGISLSSEAALNIYSHNLIKTVGDGGAGGNGGNGVGGGNGGHGGNAGSGQNSHGGAGGNGGNSGGRGSSGGNGGGGGN GGSGSNSSGGQGGDGGNAGNSGLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17680; Mature: 17680
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.6 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.6 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSQVRMGLMDYQTQIVKMEGTAVKALYILIMARVEMGGMAQQIMLRVEMAVMAAMVLPM CCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH VAPAGMEGMDKYLLSKLIFTVLLGISLSSEAALNIYSHNLIKTVGDGGAGGNGGNGVGGG HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC NGGHGGNAGSGQNSHGGAGGNGGNSGGRGSSGGNGGGGGNGGSGSNSSGGQGGDGGNAGN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGLT CCCC >Mature Secondary Structure MVSQVRMGLMDYQTQIVKMEGTAVKALYILIMARVEMGGMAQQIMLRVEMAVMAAMVLPM CCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH VAPAGMEGMDKYLLSKLIFTVLLGISLSSEAALNIYSHNLIKTVGDGGAGGNGGNGVGGG HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC NGGHGGNAGSGQNSHGGAGGNGGNSGGRGSSGGNGGGGGNGGSGSNSSGGQGGDGGNAGN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGLT CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA