Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108812886

Identifier: 108812886

GI number: 108812886

Start: 3074754

End: 3075014

Strand: Reverse

Name: 108812886

Synonym: YPN_2726

Alternate gene names: NA

Gene position: 3075014-3074754 (Counterclockwise)

Preceding gene: 108812887

Following gene: 108812885

Centisome position: 67.81

GC content: 57.09

Gene sequence:

>261_bases
ATGAGCCGCTATTCCGTAAGTGAATATACCGGAGCGTTACAAGCGCTGATGCCGATGGGATTAGTGTGGCCCCGACGGCA
CGATGGCATACAGACCGAGGTACTGCGGGCGTTGGCGAATGCTTACCAACGCAGCGATGAAGATGCACAAGATCTGCTGT
CGGCGGCTTTCCCGGCCACCGCCACGGCTCTCTTACCTGAATGGGAAGCGACACTGGGCTTGCCCGATTTGTGTGCGCGA
TTGGTGAGATCGATAGCATGA

Upstream 100 bases:

>100_bases
GCGAAGTACCTGGAAGCGGGGGGTTTATTATGGCATCCCCGTCGGCCAATATTGAACTGCAAACTGGCAAACTCCCCGTT
CGGGGTACAGTGAGTTACCT

Downstream 100 bases:

>100_bases
TCCAACGCCAGCGGGCGGTGGTCGCCAAATTGTTTGGTATTGGCGGCCAATCGGCGGCGTACTTTATCCGCGTGGCAAAG
GCTCTGGGCTATGACATTAC

Product: bacteriophage protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MSRYSVSEYTGALQALMPMGLVWPRRHDGIQTEVLRALANAYQRSDEDAQDLLSAAFPATATALLPEWEATLGLPDLCAR
LVRSIA

Sequences:

>Translated_86_residues
MSRYSVSEYTGALQALMPMGLVWPRRHDGIQTEVLRALANAYQRSDEDAQDLLSAAFPATATALLPEWEATLGLPDLCAR
LVRSIA
>Mature_85_residues
SRYSVSEYTGALQALMPMGLVWPRRHDGIQTEVLRALANAYQRSDEDAQDLLSAAFPATATALLPEWEATLGLPDLCARL
VRSIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9433; Mature: 9302

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYSVSEYTGALQALMPMGLVWPRRHDGIQTEVLRALANAYQRSDEDAQDLLSAAFPAT
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ATALLPEWEATLGLPDLCARLVRSIA
HHHHCCCHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SRYSVSEYTGALQALMPMGLVWPRRHDGIQTEVLRALANAYQRSDEDAQDLLSAAFPAT
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ATALLPEWEATLGLPDLCARLVRSIA
HHHHCCCHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA