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The map label for this gene is ymfQ [H]

Identifier: 108812885

GI number: 108812885

Start: 3074410

End: 3074814

Strand: Reverse

Name: ymfQ [H]

Synonym: YPN_2725

Alternate gene names: 108812885

Gene position: 3074814-3074410 (Counterclockwise)

Preceding gene: 108812886

Following gene: 108812884

Centisome position: 67.81

GC content: 52.84

Gene sequence:

>405_bases
ATGGGAAGCGACACTGGGCTTGCCCGATTTGTGTGCGCGATTGGTGAGATCGATAGCATGATCCAACGCCAGCGGGCGGT
GGTCGCCAAATTGTTTGGTATTGGCGGCCAATCGGCGGCGTACTTTATCCGCGTGGCAAAGGCTCTGGGCTATGACATTA
CCGTTACCCAATACCGGCAAGCCTGCGCGGGTATGTCGGTGTGCCGTGATGCATTGAACGGTGAAGAGTGGCCTTTTACC
TGGCTAATTACCGCACCGGAAACCACCATTCATAATGCCCAATGCAGCTTAACGTATTGCAGTGATCCGCTGCGTTCGTG
GGGCAATAAACAGCTTGAATGCCGGTTAGCGGTATTAAACCCGTCCCATTCTATTCTGAAGTTTGGCTATACCCTGCTTA
GTTGA

Upstream 100 bases:

>100_bases
TACTGCGGGCGTTGGCGAATGCTTACCAACGCAGCGATGAAGATGCACAAGATCTGCTGTCGGCGGCTTTCCCGGCCACC
GCCACGGCTCTCTTACCTGA

Downstream 100 bases:

>100_bases
TATTTCAGTGTGTCTATCTGGCGGCCACGCCAAGTACTTCGGGTCATTATTCATTAACCATTTCTATTTTATCGCTTTAA
CCAGTGAGGTATTACCATGC

Product: bacteriophage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MGSDTGLARFVCAIGEIDSMIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRDALNGEEWPFT
WLITAPETTIHNAQCSLTYCSDPLRSWGNKQLECRLAVLNPSHSILKFGYTLLS

Sequences:

>Translated_134_residues
MGSDTGLARFVCAIGEIDSMIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRDALNGEEWPFT
WLITAPETTIHNAQCSLTYCSDPLRSWGNKQLECRLAVLNPSHSILKFGYTLLS
>Mature_133_residues
GSDTGLARFVCAIGEIDSMIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRDALNGEEWPFTW
LITAPETTIHNAQCSLTYCSDPLRSWGNKQLECRLAVLNPSHSILKFGYTLLS

Specific function: Unknown

COG id: COG3778

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein gp48 and H.influenzae HI_1521 [H]

Homologues:

Organism=Escherichia coli, GI1787399, Length=121, Percent_Identity=33.0578512396694, Blast_Score=66, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018755 [H]

Pfam domain/function: PF10076 DUF2313 [H]

EC number: NA

Molecular weight: Translated: 14727; Mature: 14596

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSDTGLARFVCAIGEIDSMIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHH
ACAGMSVCRDALNGEEWPFTWLITAPETTIHNAQCSLTYCSDPLRSWGNKQLECRLAVLN
HHHHHHHHHHHCCCCCCCEEEEEECCCCEECCCEEEEEECCCHHHHHCCCEEEEEEEEEC
PSHSILKFGYTLLS
CCHHHHHHHHHHCC
>Mature Secondary Structure 
GSDTGLARFVCAIGEIDSMIQRQRAVVAKLFGIGGQSAAYFIRVAKALGYDITVTQYRQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHH
ACAGMSVCRDALNGEEWPFTWLITAPETTIHNAQCSLTYCSDPLRSWGNKQLECRLAVLN
HHHHHHHHHHHCCCCCCCEEEEEECCCCEECCCEEEEEECCCHHHHHCCCEEEEEEEEEC
PSHSILKFGYTLLS
CCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]