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The map label for this gene is fabG [H]

Identifier: 108812679

GI number: 108812679

Start: 2830045

End: 2830833

Strand: Reverse

Name: fabG [H]

Synonym: YPN_2518

Alternate gene names: 108812679

Gene position: 2830833-2830045 (Counterclockwise)

Preceding gene: 108812680

Following gene: 108812678

Centisome position: 62.43

GC content: 39.54

Gene sequence:

>789_bases
ATGCTGAATAACTTGAGTGAAATGACCGTATTGGTAACTGGTGGCACAAAAGGTATAGGCCGAGCCACTGTTGAAAGCTT
TGTGAAGGCGGGAGCAAAAGTATATGGCACTTATTTTTGGGGAGATAATTTAGATGAACTTGAAAACCATTTTTCTCAAT
ATCTCAATCGCCCGGTATTCCTTCAGGCTGATATCAGTGATGAGGAGATAACCACACAGCTAATCGAAAAAATTGCTCAA
GAAAATAAAAAAATTGACATTCTTATTCTCAATGCTGCGTTTGCTCCCCAATTTAAAGATACCTATAAATTTAGGGGGCT
GCTAGATAGTATTGAACACAATTCCTGGCCGCTGATTACTTATATAGATTGTATTAAGCAGCATTTTGGCCAATATCCCG
GTTATGTGGTTGCAATTACTTCGGAAGGACATCGTAGTTGCCATATAACAGGCTATGATTATGTTGCAGCATCGAAAGCG
GTACTGGAAACATTAACTAAATATATTGGTGCACGAGAAAATATCATCATTAACTGCATTTCGCCGGGTGTGGTAGATAC
GGAAGCTTTTGAATTGGTTTTTGGCAAGAAAGCACAAGCATTCATTCGAAAATTTGATCCAGATTTTATTGTTTCACCCG
AAGCGGTAGGTAACGTCAGTGTGGCTCTTTGCAGTGGATTAATGGATGCCGTGCGTGGTCAGGTCATCACCGTTGATAAT
GGCAGGATGTTTACCGATAACTTTACCAAGTGGATCGACATGATTGAGACGAATTTTATTGAGAAATAA

Upstream 100 bases:

>100_bases
TGCTAGAGGAAACAAGCACTATCGAGGCGTTTATGCACCATATTGCATTTAATCAAAGCAATATCGAACAACAAATACAA
GATAATTACACGGGTTAGAT

Downstream 100 bases:

>100_bases
TGAGGGGGACTTCATCGCCATTATGAATATTGAGCTGAGTGACCACTTGGTATTTTCACTGTATTTTGACCAAAAAGGTA
TTAGTCATGTCTAATCCCAA

Product: short-chain dehydrogenase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MLNNLSEMTVLVTGGTKGIGRATVESFVKAGAKVYGTYFWGDNLDELENHFSQYLNRPVFLQADISDEEITTQLIEKIAQ
ENKKIDILILNAAFAPQFKDTYKFRGLLDSIEHNSWPLITYIDCIKQHFGQYPGYVVAITSEGHRSCHITGYDYVAASKA
VLETLTKYIGARENIIINCISPGVVDTEAFELVFGKKAQAFIRKFDPDFIVSPEAVGNVSVALCSGLMDAVRGQVITVDN
GRMFTDNFTKWIDMIETNFIEK

Sequences:

>Translated_262_residues
MLNNLSEMTVLVTGGTKGIGRATVESFVKAGAKVYGTYFWGDNLDELENHFSQYLNRPVFLQADISDEEITTQLIEKIAQ
ENKKIDILILNAAFAPQFKDTYKFRGLLDSIEHNSWPLITYIDCIKQHFGQYPGYVVAITSEGHRSCHITGYDYVAASKA
VLETLTKYIGARENIIINCISPGVVDTEAFELVFGKKAQAFIRKFDPDFIVSPEAVGNVSVALCSGLMDAVRGQVITVDN
GRMFTDNFTKWIDMIETNFIEK
>Mature_262_residues
MLNNLSEMTVLVTGGTKGIGRATVESFVKAGAKVYGTYFWGDNLDELENHFSQYLNRPVFLQADISDEEITTQLIEKIAQ
ENKKIDILILNAAFAPQFKDTYKFRGLLDSIEHNSWPLITYIDCIKQHFGQYPGYVVAITSEGHRSCHITGYDYVAASKA
VLETLTKYIGARENIIINCISPGVVDTEAFELVFGKKAQAFIRKFDPDFIVSPEAVGNVSVALCSGLMDAVRGQVITVDN
GRMFTDNFTKWIDMIETNFIEK

Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17562908, Length=285, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 29320; Mature: 29320

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNNLSEMTVLVTGGTKGIGRATVESFVKAGAKVYGTYFWGDNLDELENHFSQYLNRPVF
CCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCEE
LQADISDEEITTQLIEKIAQENKKIDILILNAAFAPQFKDTYKFRGLLDSIEHNSWPLIT
EEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHH
YIDCIKQHFGQYPGYVVAITSEGHRSCHITGYDYVAASKAVLETLTKYIGARENIIINCI
HHHHHHHHHCCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEC
SPGVVDTEAFELVFGKKAQAFIRKFDPDFIVSPEAVGNVSVALCSGLMDAVRGQVITVDN
CCCCCCHHHHHHHHCCHHHHHHHHCCCCEEECCHHHCCHHHHHHHHHHHHHCCCEEEEEC
GRMFTDNFTKWIDMIETNFIEK
CEEECCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNNLSEMTVLVTGGTKGIGRATVESFVKAGAKVYGTYFWGDNLDELENHFSQYLNRPVF
CCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCEE
LQADISDEEITTQLIEKIAQENKKIDILILNAAFAPQFKDTYKFRGLLDSIEHNSWPLIT
EEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHH
YIDCIKQHFGQYPGYVVAITSEGHRSCHITGYDYVAASKAVLETLTKYIGARENIIINCI
HHHHHHHHHCCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEC
SPGVVDTEAFELVFGKKAQAFIRKFDPDFIVSPEAVGNVSVALCSGLMDAVRGQVITVDN
CCCCCCHHHHHHHHCCHHHHHHHHCCCCEEECCHHHCCHHHHHHHHHHHHHCCCEEEEEC
GRMFTDNFTKWIDMIETNFIEK
CEEECCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]