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The map label for this gene is kdgF [H]

Identifier: 108812066

GI number: 108812066

Start: 2146594

End: 2146944

Strand: Reverse

Name: kdgF [H]

Synonym: YPN_1904

Alternate gene names: 108812066

Gene position: 2146944-2146594 (Counterclockwise)

Preceding gene: 108812077

Following gene: 108812065

Centisome position: 47.35

GC content: 41.6

Gene sequence:

>351_bases
ATGAAAATGTTCTTTATCAATGATGAAACTCCTTGGGAAGAGTTAGGCAATGGCATTAAACGCAAAGTGATGACCTGGAG
CGATGAGCTGATGATGGTCTGTGTTCACTTTGAAAAAGGGGCTATTGGTGTCGCTCATAAACACGATATCCATGACCAGA
TTGCTTATGTTGCAGCAGGTAGCTTCGAAGTAGAGATTGAAGGGCAAAAACGTATTTTGAAAGCAGGGGATGCGTATCGC
GCGGTGAAAAATGAAATGCACGGTGCAGTATCGTTGGAAGACAACAGCATCTTGATTGATACTTTTACGCCTAAACGGGA
TGATTTTGAGACTGTAAACAATATTGTGTAA

Upstream 100 bases:

>100_bases
ATGGTCACCCTACGGATTTTACCCGTAGAATGCACTCGATTCAGCGTAAAACTGTGACTGCGCTACACCAGAAACTTATT
CTGTAAAATGAGGCAAGATA

Downstream 100 bases:

>100_bases
TTGCCTGTTTTTGATATCTTCACTCCAACAACGGAGACAGGCAAATTATGGACGAAAAGAAACTTAAAGCACTTGCGGCT
GAACTGGCTAAAGGTCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKMFFINDETPWEELGNGIKRKVMTWSDELMMVCVHFEKGAIGVAHKHDIHDQIAYVAAGSFEVEIEGQKRILKAGDAYR
AVKNEMHGAVSLEDNSILIDTFTPKRDDFETVNNIV

Sequences:

>Translated_116_residues
MKMFFINDETPWEELGNGIKRKVMTWSDELMMVCVHFEKGAIGVAHKHDIHDQIAYVAAGSFEVEIEGQKRILKAGDAYR
AVKNEMHGAVSLEDNSILIDTFTPKRDDFETVNNIV
>Mature_116_residues
MKMFFINDETPWEELGNGIKRKVMTWSDELMMVCVHFEKGAIGVAHKHDIHDQIAYVAAGSFEVEIEGQKRILKAGDAYR
AVKNEMHGAVSLEDNSILIDTFTPKRDDFETVNNIV

Specific function: May have a role in pathogenicity [H]

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 13184; Mature: 13184

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMFFINDETPWEELGNGIKRKVMTWSDELMMVCVHFEKGAIGVAHKHDIHDQIAYVAAG
CEEEEECCCCCHHHHCCHHHHHHCCCCCCEEEEEEEECCCCEECCCCCCCHHHEEEEECC
SFEVEIEGQKRILKAGDAYRAVKNEMHGAVSLEDNSILIDTFTPKRDDFETVNNIV
CEEEEECCCCEEECCCCHHHHHHHHCCCEEEECCCEEEEEECCCCCCCHHHHHCCC
>Mature Secondary Structure
MKMFFINDETPWEELGNGIKRKVMTWSDELMMVCVHFEKGAIGVAHKHDIHDQIAYVAAG
CEEEEECCCCCHHHHCCHHHHHHCCCCCCEEEEEEEECCCCEECCCCCCCHHHEEEEECC
SFEVEIEGQKRILKAGDAYRAVKNEMHGAVSLEDNSILIDTFTPKRDDFETVNNIV
CEEEEECCCCEEECCCCHHHHHHHHCCCEEEECCCEEEEEECCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1766386 [H]