Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

Click here to switch to the map view.

The map label for this gene is 108812065

Identifier: 108812065

GI number: 108812065

Start: 2146355

End: 2146546

Strand: Reverse

Name: 108812065

Synonym: YPN_1903

Alternate gene names: NA

Gene position: 2146546-2146355 (Counterclockwise)

Preceding gene: 108812066

Following gene: 108812063

Centisome position: 47.34

GC content: 43.75

Gene sequence:

>192_bases
ATGGACGAAAAGAAACTTAAAGCACTTGCGGCTGAACTGGCTAAAGGTCTTAAAACCGAAGCCGACCTTAATGCATTTTC
TCGTATGCTAACAAAGCTTACCGTCGAAACAGCGTTAAATGCAGAGCTTACCGAACACCTCGGGCACGAGAAAAATACCC
CTAAATCAGAGCCTGTCCATAATTCTGTGTAA

Upstream 100 bases:

>100_bases
ATACTTTTACGCCTAAACGGGATGATTTTGAGACTGTAAACAATATTGTGTAATTGCCTGTTTTTGATATCTTCACTCCA
ACAACGGAGACAGGCAAATT

Downstream 100 bases:

>100_bases
CTGCCACCGTATTAAAGGTGATCGCTCAGGCGGTCACCGAACTCGATAATAAAACGGCTCATCGCTAACCGCCAGTTCTG
GATCGGCATACTCCATTTTT

Product: transposase

Products: NA

Alternate protein names: Transposase Mutator Type

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSEPVHNSV

Sequences:

>Translated_63_residues
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSEPVHNSV
>Mature_63_residues
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSEPVHNSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6914; Mature: 6914

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSEPVH
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NSV
CCC
>Mature Secondary Structure
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSEPVH
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NSV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA