| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812065
Identifier: 108812065
GI number: 108812065
Start: 2146355
End: 2146546
Strand: Reverse
Name: 108812065
Synonym: YPN_1903
Alternate gene names: NA
Gene position: 2146546-2146355 (Counterclockwise)
Preceding gene: 108812066
Following gene: 108812063
Centisome position: 47.34
GC content: 43.75
Gene sequence:
>192_bases ATGGACGAAAAGAAACTTAAAGCACTTGCGGCTGAACTGGCTAAAGGTCTTAAAACCGAAGCCGACCTTAATGCATTTTC TCGTATGCTAACAAAGCTTACCGTCGAAACAGCGTTAAATGCAGAGCTTACCGAACACCTCGGGCACGAGAAAAATACCC CTAAATCAGAGCCTGTCCATAATTCTGTGTAA
Upstream 100 bases:
>100_bases ATACTTTTACGCCTAAACGGGATGATTTTGAGACTGTAAACAATATTGTGTAATTGCCTGTTTTTGATATCTTCACTCCA ACAACGGAGACAGGCAAATT
Downstream 100 bases:
>100_bases CTGCCACCGTATTAAAGGTGATCGCTCAGGCGGTCACCGAACTCGATAATAAAACGGCTCATCGCTAACCGCCAGTTCTG GATCGGCATACTCCATTTTT
Product: transposase
Products: NA
Alternate protein names: Transposase Mutator Type
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSEPVHNSV
Sequences:
>Translated_63_residues MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSEPVHNSV >Mature_63_residues MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSEPVHNSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6914; Mature: 6914
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSEPVH CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC NSV CCC >Mature Secondary Structure MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHEKNTPKSEPVH CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC NSV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA