| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is yaaX [C]
Identifier: 108812042
GI number: 108812042
Start: 2125438
End: 2125857
Strand: Reverse
Name: yaaX [C]
Synonym: YPN_1880
Alternate gene names: 108812042
Gene position: 2125857-2125438 (Counterclockwise)
Preceding gene: 108812043
Following gene: 108812041
Centisome position: 46.88
GC content: 49.05
Gene sequence:
>420_bases ATGCCATTGATTGCGCAGTCTGATGTTTCACTTGATATCAACATGCCCGGCATCAATCTGCATTTGGGTGATCAAGATAA ACGTGGCTATTACTGGGATGGATACGACTGGCAACCACCACAGTGGTGGAAAGATCATCGCGGCGCTCACATTGGTGAGC GTAATGAACGTGGTTACTCTTGGGATGGAGGCCGTTGGCAGAAACCGCAAATACAACAAGGGCGTAATCCGTTTCGTGAG CAAGACCGTGGTAATGGCATGAATAATAATCCTCAACCACCACGCGGAGAGGGGCCCCAGAAGCATTCCGACAATAATAA TAAGGGAGGTAATGGGCAGGGCCAAAGGACTATAAGCAATAATGCAGGCCCTGGCACTCAACAGGTCTACCCTCAACAGG ATAATCATGGCCATCGTTAA
Upstream 100 bases:
>100_bases GCTGAGTATTTTTTTCGTTGATATAAGTTTATCAACGATTCAATAATATATTCGGAATAATATGAAAAAATATTTGTTAT TATTTGGGGTTCTGTCATTT
Downstream 100 bases:
>100_bases TCGAGCATAACAAACAGTTGCTAACTTTACTTGTTTGCTATGACCAAGCAGAGTTAGCGACTTATTAGCAATAAAGAGCG TTTTAGCAATAAAGAGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MPLIAQSDVSLDINMPGINLHLGDQDKRGYYWDGYDWQPPQWWKDHRGAHIGERNERGYSWDGGRWQKPQIQQGRNPFRE QDRGNGMNNNPQPPRGEGPQKHSDNNNKGGNGQGQRTISNNAGPGTQQVYPQQDNHGHR
Sequences:
>Translated_139_residues MPLIAQSDVSLDINMPGINLHLGDQDKRGYYWDGYDWQPPQWWKDHRGAHIGERNERGYSWDGGRWQKPQIQQGRNPFRE QDRGNGMNNNPQPPRGEGPQKHSDNNNKGGNGQGQRTISNNAGPGTQQVYPQQDNHGHR >Mature_138_residues PLIAQSDVSLDINMPGINLHLGDQDKRGYYWDGYDWQPPQWWKDHRGAHIGERNERGYSWDGGRWQKPQIQQGRNPFREQ DRGNGMNNNPQPPRGEGPQKHSDNNNKGGNGQGQRTISNNAGPGTQQVYPQQDNHGHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15890; Mature: 15759
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIAQSDVSLDINMPGINLHLGDQDKRGYYWDGYDWQPPQWWKDHRGAHIGERNERGYS CCCCCCCCCEEEECCCCEEEEECCCCCCCEEECCCCCCCCCHHHHCCCCCCCCCCCCCCC WDGGRWQKPQIQQGRNPFREQDRGNGMNNNPQPPRGEGPQKHSDNNNKGGNGQGQRTISN CCCCCCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC NAGPGTQQVYPQQDNHGHR CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PLIAQSDVSLDINMPGINLHLGDQDKRGYYWDGYDWQPPQWWKDHRGAHIGERNERGYS CCCCCCCCEEEECCCCEEEEECCCCCCCEEECCCCCCCCCHHHHCCCCCCCCCCCCCCC WDGGRWQKPQIQQGRNPFREQDRGNGMNNNPQPPRGEGPQKHSDNNNKGGNGQGQRTISN CCCCCCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC NAGPGTQQVYPQQDNHGHR CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA