Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108811906

Identifier: 108811906

GI number: 108811906

Start: 1965431

End: 1965901

Strand: Reverse

Name: 108811906

Synonym: YPN_1744

Alternate gene names: NA

Gene position: 1965901-1965431 (Counterclockwise)

Preceding gene: 108811907

Following gene: 108811905

Centisome position: 43.35

GC content: 45.65

Gene sequence:

>471_bases
ATGCGCATACATCAGGAAAATACCGCTAAAAAGCTATATCGAAGAGTTAACACCACCACACGTCACCGCTCAAACAACCC
AGGCGCAGAATATCGTTGGGAACGGTATAAACAGAAAGCAACAGATGAGAACATGCCACAGCGTGCATCAATGCATGGTA
AGCAGAAACGAGGCTTGGATTACTCCCCGCTGTTTATGTTTCTGCTGACTAAAGTGGGCCAGCAATGGGATGAGGTATAC
AGTCATGCGGTGAAACGCCTTGATAAACCTGAGCCGATTTTTTGGATGGTCGCATTGCACTCACATGAACAGCGCGACTA
TGTCCGTTGTGGCGATACCTGTTTTTATCATGGCTTATATGTTGATGACGCAGGTATATTGCAAAAGGTGAATCCATCAC
TGAGTGCAGAAGATATTCCGATGACATGCCAGTGCTGTACACATACATTCAATGGTGTTGTGGTGACATGA

Upstream 100 bases:

>100_bases
GGTGTCATTTAATCATTATTGAGACTGAGGAGGCGGGTTATCACCAGCGCCAAAGGTTTTATTTTATGTCTAATCAGCTA
AAAGTAATGGATTACCATTG

Downstream 100 bases:

>100_bases
GTTGCTATCGATGTTCGGTGGTTATAAAACAGCTAAAGAGAGTGCCTAAATGGGGAGTGACGTGTGGCCACAATGAAAGA
TGTTGCGCTGAGGGCTGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MRIHQENTAKKLYRRVNTTTRHRSNNPGAEYRWERYKQKATDENMPQRASMHGKQKRGLDYSPLFMFLLTKVGQQWDEVY
SHAVKRLDKPEPIFWMVALHSHEQRDYVRCGDTCFYHGLYVDDAGILQKVNPSLSAEDIPMTCQCCTHTFNGVVVT

Sequences:

>Translated_156_residues
MRIHQENTAKKLYRRVNTTTRHRSNNPGAEYRWERYKQKATDENMPQRASMHGKQKRGLDYSPLFMFLLTKVGQQWDEVY
SHAVKRLDKPEPIFWMVALHSHEQRDYVRCGDTCFYHGLYVDDAGILQKVNPSLSAEDIPMTCQCCTHTFNGVVVT
>Mature_156_residues
MRIHQENTAKKLYRRVNTTTRHRSNNPGAEYRWERYKQKATDENMPQRASMHGKQKRGLDYSPLFMFLLTKVGQQWDEVY
SHAVKRLDKPEPIFWMVALHSHEQRDYVRCGDTCFYHGLYVDDAGILQKVNPSLSAEDIPMTCQCCTHTFNGVVVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18296; Mature: 18296

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIHQENTAKKLYRRVNTTTRHRSNNPGAEYRWERYKQKATDENMPQRASMHGKQKRGLD
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCHHHCCCC
YSPLFMFLLTKVGQQWDEVYSHAVKRLDKPEPIFWMVALHSHEQRDYVRCGDTCFYHGLY
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHCCHHEECCEE
VDDAGILQKVNPSLSAEDIPMTCQCCTHTFNGVVVT
ECCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEC
>Mature Secondary Structure
MRIHQENTAKKLYRRVNTTTRHRSNNPGAEYRWERYKQKATDENMPQRASMHGKQKRGLD
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCHHHCCCC
YSPLFMFLLTKVGQQWDEVYSHAVKRLDKPEPIFWMVALHSHEQRDYVRCGDTCFYHGLY
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHCCHHEECCEE
VDDAGILQKVNPSLSAEDIPMTCQCCTHTFNGVVVT
ECCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA