| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is pheA [H]
Identifier: 108810980
GI number: 108810980
Start: 944622
End: 945779
Strand: Reverse
Name: pheA [H]
Synonym: YPN_0815
Alternate gene names: 108810980
Gene position: 945779-944622 (Counterclockwise)
Preceding gene: 108810982
Following gene: 108810977
Centisome position: 20.86
GC content: 47.84
Gene sequence:
>1158_bases ATGACCGATAATCCATTACTGGTGCTGCGTGAACGTATCAGTGCATTAGATTTAAAACTGCTGGCTTTGCTGGCAGAACG GCGTGAACTGGCAGTGGATGTGGCCAAAGCCAAGCAGCTCCATCATCGCCCAATTCGCGATAAAGAACGTGAGCGTGACT TATTAGACGCACTGATCGATGCCGCTAAGCCTTATAATCTTGATGGATTCTATGTCACACGCCTGTTTCAGCTGATTATT GAAGATTCCGTATTGACCCAGCAGGCTTTATTGCAACATCAGCTTAACCAAACCGCCCTGCTCTCTGCCCGTATCGCCTT CCTTGGCCCTAAGGGCTCCTATTCACATCTGGCAGCTCGCCAATATGCAGCACGTCATTTTGAGCAATTAATTGAATGCG GTTGCCTGAAATTCCAAGACATTTTTACCCAGGTTGAGACCGGGCAAGCGGATTACGCCGTACTGCCGATCGAGAATACC AGTTCAGGTTCTATTAATGATGTGTATGACTTACTCCAACACACCAGCTTGTCTATTGTGGGCGAAATAACCAACCCTAT CGAGCACTGCGTACTCATTGCCACAGAAACAGATTTGAACAAAATTGAGACTGTATACAGCCATCCTCAGCCTTTCCAGC AATGCAGCCAGTTCATTAATCGTTTCCCACATTGGAAAATTGAGTATTGTGAGAGTACGGCTGCCGCGATGGAAAAAGTT GCAGGAATGAAATCACCAACGGCGGCTGCATTAGGTAGTGAAGCGGGCGGTGCGCTCTATAATCTGCAAGTGCTGGAGCA CAATCTGGCAAATCAGCAACAAAATATTACTCGATTCATTGTCCTTGCCCGCAAACCCATTGATGTATCTGAGCAAATCC CGGCCAAAACCACCTTAATTATGGCGACCGGGCAGCAATCCGGGGCATTGGTAGAGGCTTTGCTGGTACTCAGAGAGCAT GGCATTATCATGACGAAACTGGAGTCCCGGCCAATTAATGGCAACCCGTGGGAAGAGATGTTTTATATTGATGTGCAGGC CAATATACGTTCAGAAGCGATGCAAAAAGCATTGGCCGATCTAACACCGATTACCCGTTCCTTAAAAGTGTTGGGCTGCT ACCCAAGTGAGAACGTCGTTCCCGTCGAGCCTCGGTAA
Upstream 100 bases:
>100_bases TATGCCCGTCATACTTCAAGCTGCATGTGCGTTAGTCGCTTTCATGCAACTCGAATTATTGAAAGTGTAATCATTCATAA AAATTATAAGGCAAAAGTCT
Downstream 100 bases:
>100_bases CGCCCTTTATTCAGGCTCATTTTATGCGCCCACACCATAAAAAAAGTCATCCCGGCAGGCTGTGCTGGGATGACCTATAA AAATCTATCACTTGCTGATG
Product: bifunctional chorismate mutase/prephenate dehydratase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MTDNPLLVLRERISALDLKLLALLAERRELAVDVAKAKQLHHRPIRDKERERDLLDALIDAAKPYNLDGFYVTRLFQLII EDSVLTQQALLQHQLNQTALLSARIAFLGPKGSYSHLAARQYAARHFEQLIECGCLKFQDIFTQVETGQADYAVLPIENT SSGSINDVYDLLQHTSLSIVGEITNPIEHCVLIATETDLNKIETVYSHPQPFQQCSQFINRFPHWKIEYCESTAAAMEKV AGMKSPTAAALGSEAGGALYNLQVLEHNLANQQQNITRFIVLARKPIDVSEQIPAKTTLIMATGQQSGALVEALLVLREH GIIMTKLESRPINGNPWEEMFYIDVQANIRSEAMQKALADLTPITRSLKVLGCYPSENVVPVEPR
Sequences:
>Translated_385_residues MTDNPLLVLRERISALDLKLLALLAERRELAVDVAKAKQLHHRPIRDKERERDLLDALIDAAKPYNLDGFYVTRLFQLII EDSVLTQQALLQHQLNQTALLSARIAFLGPKGSYSHLAARQYAARHFEQLIECGCLKFQDIFTQVETGQADYAVLPIENT SSGSINDVYDLLQHTSLSIVGEITNPIEHCVLIATETDLNKIETVYSHPQPFQQCSQFINRFPHWKIEYCESTAAAMEKV AGMKSPTAAALGSEAGGALYNLQVLEHNLANQQQNITRFIVLARKPIDVSEQIPAKTTLIMATGQQSGALVEALLVLREH GIIMTKLESRPINGNPWEEMFYIDVQANIRSEAMQKALADLTPITRSLKVLGCYPSENVVPVEPR >Mature_384_residues TDNPLLVLRERISALDLKLLALLAERRELAVDVAKAKQLHHRPIRDKERERDLLDALIDAAKPYNLDGFYVTRLFQLIIE DSVLTQQALLQHQLNQTALLSARIAFLGPKGSYSHLAARQYAARHFEQLIECGCLKFQDIFTQVETGQADYAVLPIENTS SGSINDVYDLLQHTSLSIVGEITNPIEHCVLIATETDLNKIETVYSHPQPFQQCSQFINRFPHWKIEYCESTAAAMEKVA GMKSPTAAALGSEAGGALYNLQVLEHNLANQQQNITRFIVLARKPIDVSEQIPAKTTLIMATGQQSGALVEALLVLREHG IIMTKLESRPINGNPWEEMFYIDVQANIRSEAMQKALADLTPITRSLKVLGCYPSENVVPVEPR
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=383, Percent_Identity=76.7624020887728, Blast_Score=613, Evalue=1e-177, Organism=Saccharomyces cerevisiae, GI6324013, Length=329, Percent_Identity=25.531914893617, Blast_Score=98, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010952 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 43033; Mature: 42902
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00857 PREPHENATE_DEHYDR_1 ; PS00858 PREPHENATE_DEHYDR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNPLLVLRERISALDLKLLALLAERRELAVDVAKAKQLHHRPIRDKERERDLLDALID CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AAKPYNLDGFYVTRLFQLIIEDSVLTQQALLQHQLNQTALLSARIAFLGPKGSYSHLAAR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEECCCCCHHHHHHH QYAARHFEQLIECGCLKFQDIFTQVETGQADYAVLPIENTSSGSINDVYDLLQHTSLSIV HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHH GEITNPIEHCVLIATETDLNKIETVYSHPQPFQQCSQFINRFPHWKIEYCESTAAAMEKV HHHHCCHHHEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH AGMKSPTAAALGSEAGGALYNLQVLEHNLANQQQNITRFIVLARKPIDVSEQIPAKTTLI HCCCCCCHHHHCCCCCCCEEEHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEE MATGQQSGALVEALLVLREHGIIMTKLESRPINGNPWEEMFYIDVQANIRSEAMQKALAD EEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHH LTPITRSLKVLGCYPSENVVPVEPR HHHHHHCCEEEEECCCCCEEECCCC >Mature Secondary Structure TDNPLLVLRERISALDLKLLALLAERRELAVDVAKAKQLHHRPIRDKERERDLLDALID CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AAKPYNLDGFYVTRLFQLIIEDSVLTQQALLQHQLNQTALLSARIAFLGPKGSYSHLAAR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEECCCCCHHHHHHH QYAARHFEQLIECGCLKFQDIFTQVETGQADYAVLPIENTSSGSINDVYDLLQHTSLSIV HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHH GEITNPIEHCVLIATETDLNKIETVYSHPQPFQQCSQFINRFPHWKIEYCESTAAAMEKV HHHHCCHHHEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH AGMKSPTAAALGSEAGGALYNLQVLEHNLANQQQNITRFIVLARKPIDVSEQIPAKTTLI HCCCCCCHHHHCCCCCCCEEEHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEE MATGQQSGALVEALLVLREHGIIMTKLESRPINGNPWEEMFYIDVQANIRSEAMQKALAD EEECCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHH LTPITRSLKVLGCYPSENVVPVEPR HHHHHHCCEEEEECCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1512561; 1444388 [H]