Click here to switch to the map view.

The map label for this gene is yehT [C]

Identifier: 108810977

GI number: 108810977

Start: 941364

End: 942080

Strand: Reverse

Name: yehT [C]

Synonym: YPN_0812

Alternate gene names: 108810977

Gene position: 942080-941364 (Counterclockwise)

Preceding gene: 108810980

Following gene: 108810976

Centisome position: 20.78

GC content: 44.77

Gene sequence:

>717_bases
ATGTTAAGAGTCATCATCGTCGACGATGAACAACCTGCGCGTGAAGATTTACGCGAAAGACTGAATGAAGAACACGGTAT
CGAGATCGTCGCCGAATGCAGCAATGCTCTGGAAGCAATTCCTGCTATCCAGCGCCTACAGCCTGATGTGGTATTTCTCG
ACATCCAGATGCCCAGAATCAATGGGTTAGAATTGGCCTCAATGCTGAACCCTGAAAGCATGCCACATATCGTATTTGTC
ACCGCTTACGATGAATATGCCATTCGCGCTTTTGAAGAACATGCTTTTGACTATCTGTTAAAACCACTCGACCATCAACG
TTTGGCGAAGACACTGACACGTCTAAGTCGCGATTTAATCGTAAAGAATAATTTACACAAAGTTATCGAACCAATACTTC
GTCATATCCCCTGTTCAGGCCACAACCGTATTTTTTTGCTGAAAATTGAAGAAGTAGAATACCTAAGCTCCGAGCTTAGC
GGGGTGCATGTGGTGGGAACCGTGCAATCAGGTTATACCCAGCTATCGTTAAAAACACTGGAGGAAAAAACTCCGTTTAT
TCGGTGCCACCGGCAATATATGGTGAATACCGAACAATTGGGGGAAATTCAGCTTATGGATAATGGTGCGGCTGAAGTCA
TCACTCGTTCAGGAAAGCATATCCCTGTTAGCCGCCGCTATTTAAAGTCCCTGAAGGAGAAATTAGGCATCGCATAA

Upstream 100 bases:

>100_bases
CACATCTCAATCTAACTTTTGCGGTAAGTCGCAGTTTCCATCCTTGGTCCCGTGCTCCCTCAGAGGCCATGATAAAATAG
AAAAAATTTGTGGAGGCTGT

Downstream 100 bases:

>100_bases
ATAGGCTCCGGAATGAATAGAGATACCCATCATACGTCAAGCTGCATGTGCGTTGGCTACGCTCGTTACTCCGGGTAGCA
TAAATACTGTTCAAATCGGT

Product: putative two-component response-regulatory protein YehT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MLRVIIVDDEQPAREDLRERLNEEHGIEIVAECSNALEAIPAIQRLQPDVVFLDIQMPRINGLELASMLNPESMPHIVFV
TAYDEYAIRAFEEHAFDYLLKPLDHQRLAKTLTRLSRDLIVKNNLHKVIEPILRHIPCSGHNRIFLLKIEEVEYLSSELS
GVHVVGTVQSGYTQLSLKTLEEKTPFIRCHRQYMVNTEQLGEIQLMDNGAAEVITRSGKHIPVSRRYLKSLKEKLGIA

Sequences:

>Translated_238_residues
MLRVIIVDDEQPAREDLRERLNEEHGIEIVAECSNALEAIPAIQRLQPDVVFLDIQMPRINGLELASMLNPESMPHIVFV
TAYDEYAIRAFEEHAFDYLLKPLDHQRLAKTLTRLSRDLIVKNNLHKVIEPILRHIPCSGHNRIFLLKIEEVEYLSSELS
GVHVVGTVQSGYTQLSLKTLEEKTPFIRCHRQYMVNTEQLGEIQLMDNGAAEVITRSGKHIPVSRRYLKSLKEKLGIA
>Mature_238_residues
MLRVIIVDDEQPAREDLRERLNEEHGIEIVAECSNALEAIPAIQRLQPDVVFLDIQMPRINGLELASMLNPESMPHIVFV
TAYDEYAIRAFEEHAFDYLLKPLDHQRLAKTLTRLSRDLIVKNNLHKVIEPILRHIPCSGHNRIFLLKIEEVEYLSSELS
GVHVVGTVQSGYTQLSLKTLEEKTPFIRCHRQYMVNTEQLGEIQLMDNGAAEVITRSGKHIPVSRRYLKSLKEKLGIA

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082052, Length=239, Percent_Identity=57.7405857740586, Blast_Score=283, Evalue=9e-78,
Organism=Escherichia coli, GI1788724, Length=240, Percent_Identity=28.75, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1788192, Length=106, Percent_Identity=34.9056603773585, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 27267; Mature: 27267

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRVIIVDDEQPAREDLRERLNEEHGIEIVAECSNALEAIPAIQRLQPDVVFLDIQMPRI
CEEEEEECCCCCHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
NGLELASMLNPESMPHIVFVTAYDEYAIRAFEEHAFDYLLKPLDHQRLAKTLTRLSRDLI
CCHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VKNNLHKVIEPILRHIPCSGHNRIFLLKIEEVEYLSSELSGVHVVGTVQSGYTQLSLKTL
HHCCHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHCCCEEEEEEECCCCEEHHHHHH
EEKTPFIRCHRQYMVNTEQLGEIQLMDNGAAEVITRSGKHIPVSRRYLKSLKEKLGIA
HHCCHHHHHHHHHHCCHHHCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRVIIVDDEQPAREDLRERLNEEHGIEIVAECSNALEAIPAIQRLQPDVVFLDIQMPRI
CEEEEEECCCCCHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
NGLELASMLNPESMPHIVFVTAYDEYAIRAFEEHAFDYLLKPLDHQRLAKTLTRLSRDLI
CCHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VKNNLHKVIEPILRHIPCSGHNRIFLLKIEEVEYLSSELSGVHVVGTVQSGYTQLSLKTL
HHCCHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHCCCEEEEEEECCCCEEHHHHHH
EEKTPFIRCHRQYMVNTEQLGEIQLMDNGAAEVITRSGKHIPVSRRYLKSLKEKLGIA
HHCCHHHHHHHHHHCCHHHCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]