| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801740
Identifier: 108801740
GI number: 108801740
Start: 5053435
End: 5054514
Strand: Reverse
Name: 108801740
Synonym: Mmcs_4777
Alternate gene names: NA
Gene position: 5054514-5053435 (Counterclockwise)
Preceding gene: 108801741
Following gene: 108801739
Centisome position: 88.59
GC content: 71.39
Gene sequence:
>1080_bases ATGAGCGCGTCGTCGGCCGACCTCACGGTCGGGCGCACCGTGGACTGGCGCTTCGCGGCCACCGTCGGCGCCAAGCTCGT CCGGCCCGGCCCGCCCGCCACCGACTACACCCGCCGCCAGGCCGTCGAACAGCTCGCCACCGCGTCGCGGGAGGCCGAAC TGCCCGTACGCGAGGTCACCGGGCTCACCGAGGGCAACGCCGTCACCGAGGCCCGCATCATCGACCGCCCCGGGTGGATC CAGGCCGCGGCACAGTCGATGCGGACGATGACCGGTGGCACCGACCGGCCGAGCAATTTCCTGACCGGCCGCGTCACCGG CGCGCAGACCGGAGCGGTGCTGGCATTCGTGTCGTCGGGCATCCTCGGCCAGTACGACCCGTTCGCGACCGCCGGAGGGC AGGAGCGAAGCGACCCGGGAAATGGTCCGAGCGGTGAACTGCTGCTGGTGTGGCCGAACGTGATCGCGGTGGAACGTCAG CTGCGGGTGTCGCCCACCGACTTCCGGCTGTGGGTGTGCCTGCACGAGGTCACCCACCGCGTCCAGTTCGGCGCCAACCC GTGGCTGGCCGACCACATGTCGTCGGCGCTGGCGGTGCTGACCAAGGACGCCGGAGAAGACGTCACCGAGGTGGCCGGGC GGCTGGCCGACTATGTGCGCAACCGGCGCGCGCACACCGACGCGCACTCGACCGGGGTGCTGGGGCTGATGCGCGCGATG CAGGCCGAACCGCAGCGGCGCGCACTCGACCAGCTACTGGTGCTGGGCACCCTGCTCGAGGGGCACGCCGACCACGTGAT GGACGCGGTGGGCCCCGCCGTCGTGCCGTCGGTGGCCACCATCCGCGCCCGCTTCAACCAGCGGCGCGAGCGCAAACAGC CGCCCGTGCAGCGCATCCTGCGCGCACTGCTCGGCGTCGACGCCAAGATCAGCCAGTACACCCGCGGTAAGGCGTTCGTC GACCACGTCGTGGCCAAGGTCGGGATGGAGCGGTTCAACACCGTCTGGTCCGGACCCGAAACCCTGCCGCTGCCAACAGA AGTCGACGAGCCGCAGCGATGGATCGACCGCGTGCTGTAG
Upstream 100 bases:
>100_bases GCGTGCTGACGTTCGCGCTGATGTCGAACAACGCCGGCCCGACCGGCCGCACGGCCCTCGACGCCCTGGCCGCCACGCTG CGCGCCTGCGGGTGCGGCTC
Downstream 100 bases:
>100_bases CCGCGCTGCGCACCGAGGTGGCCCGGTTCGCCCGCCGCCACCTGGCCGGCACGCAACGCTGGTGTGTGGCGCTGTCCGGC GGAGCCGATTCGCTGGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MSASSADLTVGRTVDWRFAATVGAKLVRPGPPATDYTRRQAVEQLATASREAELPVREVTGLTEGNAVTEARIIDRPGWI QAAAQSMRTMTGGTDRPSNFLTGRVTGAQTGAVLAFVSSGILGQYDPFATAGGQERSDPGNGPSGELLLVWPNVIAVERQ LRVSPTDFRLWVCLHEVTHRVQFGANPWLADHMSSALAVLTKDAGEDVTEVAGRLADYVRNRRAHTDAHSTGVLGLMRAM QAEPQRRALDQLLVLGTLLEGHADHVMDAVGPAVVPSVATIRARFNQRRERKQPPVQRILRALLGVDAKISQYTRGKAFV DHVVAKVGMERFNTVWSGPETLPLPTEVDEPQRWIDRVL
Sequences:
>Translated_359_residues MSASSADLTVGRTVDWRFAATVGAKLVRPGPPATDYTRRQAVEQLATASREAELPVREVTGLTEGNAVTEARIIDRPGWI QAAAQSMRTMTGGTDRPSNFLTGRVTGAQTGAVLAFVSSGILGQYDPFATAGGQERSDPGNGPSGELLLVWPNVIAVERQ LRVSPTDFRLWVCLHEVTHRVQFGANPWLADHMSSALAVLTKDAGEDVTEVAGRLADYVRNRRAHTDAHSTGVLGLMRAM QAEPQRRALDQLLVLGTLLEGHADHVMDAVGPAVVPSVATIRARFNQRRERKQPPVQRILRALLGVDAKISQYTRGKAFV DHVVAKVGMERFNTVWSGPETLPLPTEVDEPQRWIDRVL >Mature_358_residues SASSADLTVGRTVDWRFAATVGAKLVRPGPPATDYTRRQAVEQLATASREAELPVREVTGLTEGNAVTEARIIDRPGWIQ AAAQSMRTMTGGTDRPSNFLTGRVTGAQTGAVLAFVSSGILGQYDPFATAGGQERSDPGNGPSGELLLVWPNVIAVERQL RVSPTDFRLWVCLHEVTHRVQFGANPWLADHMSSALAVLTKDAGEDVTEVAGRLADYVRNRRAHTDAHSTGVLGLMRAMQ AEPQRRALDQLLVLGTLLEGHADHVMDAVGPAVVPSVATIRARFNQRRERKQPPVQRILRALLGVDAKISQYTRGKAFVD HVVAKVGMERFNTVWSGPETLPLPTEVDEPQRWIDRVL
Specific function: Unknown
COG id: COG5282
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39085; Mature: 38954
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASSADLTVGRTVDWRFAATVGAKLVRPGPPATDYTRRQAVEQLATASREAELPVREVT CCCCCCCEEECCCCCHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHC GLTEGNAVTEARIIDRPGWIQAAAQSMRTMTGGTDRPSNFLTGRVTGAQTGAVLAFVSSG CCCCCCCHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCC ILGQYDPFATAGGQERSDPGNGPSGELLLVWPNVIAVERQLRVSPTDFRLWVCLHEVTHR CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHH VQFGANPWLADHMSSALAVLTKDAGEDVTEVAGRLADYVRNRRAHTDAHSTGVLGLMRAM HHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QAEPQRRALDQLLVLGTLLEGHADHVMDAVGPAVVPSVATIRARFNQRRERKQPPVQRIL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH RALLGVDAKISQYTRGKAFVDHVVAKVGMERFNTVWSGPETLPLPTEVDEPQRWIDRVL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure SASSADLTVGRTVDWRFAATVGAKLVRPGPPATDYTRRQAVEQLATASREAELPVREVT CCCCCCEEECCCCCHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHC GLTEGNAVTEARIIDRPGWIQAAAQSMRTMTGGTDRPSNFLTGRVTGAQTGAVLAFVSSG CCCCCCCHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCC ILGQYDPFATAGGQERSDPGNGPSGELLLVWPNVIAVERQLRVSPTDFRLWVCLHEVTHR CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHH VQFGANPWLADHMSSALAVLTKDAGEDVTEVAGRLADYVRNRRAHTDAHSTGVLGLMRAM HHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QAEPQRRALDQLLVLGTLLEGHADHVMDAVGPAVVPSVATIRARFNQRRERKQPPVQRIL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH RALLGVDAKISQYTRGKAFVDHVVAKVGMERFNTVWSGPETLPLPTEVDEPQRWIDRVL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA