Click here to switch to the map view.

The map label for this gene is 108801635

Identifier: 108801635

GI number: 108801635

Start: 4953276

End: 4954433

Strand: Reverse

Name: 108801635

Synonym: Mmcs_4672

Alternate gene names: NA

Gene position: 4954433-4953276 (Counterclockwise)

Preceding gene: 108801636

Following gene: 108801634

Centisome position: 86.84

GC content: 67.36

Gene sequence:

>1158_bases
ATGCTCTCCGGAAAGGCCGCGATCGCGGGTATCGGCGCGACCGACTTCTCCAAGAACTCGGGTCGCAGCGAGCTGCGCCT
CGCGGCCGAGGCCGTACTCGATGCGCTCGACGACGCCGGTCTCGCGCCGTCGGACGTCGACGGCCTGGTGACCTTCACGA
TGGACTCGAACCTGGAGACCGCCGTCGCGCGTTCGACCGGCATCGGCGAGCTGAAGTTCTTCAGCCAGATCGGTTACGGC
GGAGGGGCGGCGGCCGCCACCGTGCAGCAGGCGGCACTGGCCGTCGCGACCGGGGTGGCCGAGGTCGTGGTGGCGTACCG
GGCGTTCAACGAGCGTTCGGAGCACCGCTTCGGTCAGGTCATGACCGGCCTGACGGTCAACGCCGACTCCCGCGGTGTGG
AGTACAGCTGGTCCTATCCGCACGGCCTGAGCACGCCGGCCGCGTCGGTGGCGATGATCGCGCGGCGGTACATGCACGAA
TTCGGCGCCACCAGCGCCGATTTCGGCGCGGTCTCGGTAGCCGACCGCAAACACGCGGCGAACAATCCGAAGGCGCACTT
CTACGGTAAGCCCATCACCATCGAGGATCACCAGAACTCGAGGTGGATCGCAGAACCGCTGCGGCTGCTGGACTGCTGTC
AGGAGACCGACGGCGGCGTCGCGATCGTGGTGACCACCCCGGAGCGCGCCAAGGATCTCAAACAGCGCCCGGCGATCATC
GAGGCAGCCGCCCAGGCCGCCGGCGCCGACCAGTTCACGATGTACTCGTATTACCGCGAGGAACTCGGCCTGCCGGAGAT
GGGTCTGGTCGGGCGCCAACTGTGGGAGCAGAGCGGATTGTCGCCCACCGACATCCAGACGGCGGTCCTCTACGACCACT
TCACCCCGTACACGCTGATCCAACTCGAGGAGTTGGGCTTCTGCGGTAAGGGTGAGGCCAAGGACTTCATCGCCGGCGGT
GCGATCGAGATCGGCGGCAAGCTGCCGATCAACACCCACGGCGGCCAACTCGGTGAGGCCTACATCCACGGGATGAACGG
CATCGCCGAAGGGGTGCGCCAACTGCGCGGCACATCGGTGAACCAGGTCGACGGGGTCGAACACGTCCTGGTCACCGCGG
GTACCGGCGTGCCCACCTCGGGGCTGATCCTCGGCTGA

Upstream 100 bases:

>100_bases
CCGCCGTCGACGACGGAGTCACCACGGTGAAGGTGGTGGGCGCCAACAGTCTCGGAAATCACGTCATCGCAACGGCGACA
ATCGTTTTGGGGGACCACTG

Downstream 100 bases:

>100_bases
ATTCCCGCGGGTACTCCCGCCAGCTACGCGGTAAAGTTTGCTGACGAAGAAGTCGTGACCGCGGATACAGGGGGCCCGTG
CTCGTGGGAATCATGCCGGA

Product: lipid-transfer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MLSGKAAIAGIGATDFSKNSGRSELRLAAEAVLDALDDAGLAPSDVDGLVTFTMDSNLETAVARSTGIGELKFFSQIGYG
GGAAAATVQQAALAVATGVAEVVVAYRAFNERSEHRFGQVMTGLTVNADSRGVEYSWSYPHGLSTPAASVAMIARRYMHE
FGATSADFGAVSVADRKHAANNPKAHFYGKPITIEDHQNSRWIAEPLRLLDCCQETDGGVAIVVTTPERAKDLKQRPAII
EAAAQAAGADQFTMYSYYREELGLPEMGLVGRQLWEQSGLSPTDIQTAVLYDHFTPYTLIQLEELGFCGKGEAKDFIAGG
AIEIGGKLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSVNQVDGVEHVLVTAGTGVPTSGLILG

Sequences:

>Translated_385_residues
MLSGKAAIAGIGATDFSKNSGRSELRLAAEAVLDALDDAGLAPSDVDGLVTFTMDSNLETAVARSTGIGELKFFSQIGYG
GGAAAATVQQAALAVATGVAEVVVAYRAFNERSEHRFGQVMTGLTVNADSRGVEYSWSYPHGLSTPAASVAMIARRYMHE
FGATSADFGAVSVADRKHAANNPKAHFYGKPITIEDHQNSRWIAEPLRLLDCCQETDGGVAIVVTTPERAKDLKQRPAII
EAAAQAAGADQFTMYSYYREELGLPEMGLVGRQLWEQSGLSPTDIQTAVLYDHFTPYTLIQLEELGFCGKGEAKDFIAGG
AIEIGGKLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSVNQVDGVEHVLVTAGTGVPTSGLILG
>Mature_385_residues
MLSGKAAIAGIGATDFSKNSGRSELRLAAEAVLDALDDAGLAPSDVDGLVTFTMDSNLETAVARSTGIGELKFFSQIGYG
GGAAAATVQQAALAVATGVAEVVVAYRAFNERSEHRFGQVMTGLTVNADSRGVEYSWSYPHGLSTPAASVAMIARRYMHE
FGATSADFGAVSVADRKHAANNPKAHFYGKPITIEDHQNSRWIAEPLRLLDCCQETDGGVAIVVTTPERAKDLKQRPAII
EAAAQAAGADQFTMYSYYREELGLPEMGLVGRQLWEQSGLSPTDIQTAVLYDHFTPYTLIQLEELGFCGKGEAKDFIAGG
AIEIGGKLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSVNQVDGVEHVLVTAGTGVPTSGLILG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI19923233, Length=367, Percent_Identity=26.4305177111717, Blast_Score=96, Evalue=8e-20,
Organism=Homo sapiens, GI302344762, Length=297, Percent_Identity=26.9360269360269, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI302344767, Length=271, Percent_Identity=26.9372693726937, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI302344760, Length=271, Percent_Identity=26.9372693726937, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI55956775, Length=270, Percent_Identity=25.9259259259259, Blast_Score=87, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17537653, Length=372, Percent_Identity=23.9247311827957, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI19921506, Length=370, Percent_Identity=26.4864864864865, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24585051, Length=370, Percent_Identity=25.9459459459459, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002155
- InterPro:   IPR016039
- InterPro:   IPR016038
- InterPro:   IPR020617
- InterPro:   IPR020616 [H]

Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]

EC number: NA

Molecular weight: Translated: 40579; Mature: 40579

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSGKAAIAGIGATDFSKNSGRSELRLAAEAVLDALDDAGLAPSDVDGLVTFTMDSNLET
CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHH
AVARSTGIGELKFFSQIGYGGGAAAATVQQAALAVATGVAEVVVAYRAFNERSEHRFGQV
HHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTGLTVNADSRGVEYSWSYPHGLSTPAASVAMIARRYMHEFGATSADFGAVSVADRKHAA
HHCEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCC
NNPKAHFYGKPITIEDHQNSRWIAEPLRLLDCCQETDGGVAIVVTTPERAKDLKQRPAII
CCCCCEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCHHH
EAAAQAAGADQFTMYSYYREELGLPEMGLVGRQLWEQSGLSPTDIQTAVLYDHFTPYTLI
HHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEE
QLEELGFCGKGEAKDFIAGGAIEIGGKLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSV
EEHHCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCC
NQVDGVEHVLVTAGTGVPTSGLILG
CHHCCCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MLSGKAAIAGIGATDFSKNSGRSELRLAAEAVLDALDDAGLAPSDVDGLVTFTMDSNLET
CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHH
AVARSTGIGELKFFSQIGYGGGAAAATVQQAALAVATGVAEVVVAYRAFNERSEHRFGQV
HHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTGLTVNADSRGVEYSWSYPHGLSTPAASVAMIARRYMHEFGATSADFGAVSVADRKHAA
HHCEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCC
NNPKAHFYGKPITIEDHQNSRWIAEPLRLLDCCQETDGGVAIVVTTPERAKDLKQRPAII
CCCCCEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCHHH
EAAAQAAGADQFTMYSYYREELGLPEMGLVGRQLWEQSGLSPTDIQTAVLYDHFTPYTLI
HHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEE
QLEELGFCGKGEAKDFIAGGAIEIGGKLPINTHGGQLGEAYIHGMNGIAEGVRQLRGTSV
EEHHCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCC
NQVDGVEHVLVTAGTGVPTSGLILG
CHHCCCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]