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The map label for this gene is yrbE [C]

Identifier: 108801582

GI number: 108801582

Start: 4892344

End: 4893108

Strand: Reverse

Name: yrbE [C]

Synonym: Mmcs_4619

Alternate gene names: 108801582

Gene position: 4893108-4892344 (Counterclockwise)

Preceding gene: 108801583

Following gene: 108801581

Centisome position: 85.76

GC content: 67.97

Gene sequence:

>765_bases
TTGAAGGAACAGCTCGCGGCGCCGGCCCGGGCGGTCGGCGGATTCGTCGAGATGTCCATCGACACGTTCGTGAAGACGTT
CCGCAGGCCGTTCCAGTTTCGGGAGTTCCTCGATCAGACCTGGATGATCGCGCGGGTCTCGCTCATCCCGACCCTCCTGG
TCGCCATCCCGTTCACCGTGCTCGTGGCGTTCACGCTCAACATCCTGCTGCGCGAGATCGGCGCTGCGGACCTGTCGGGT
GCGGGCACCGCTTTCGGCACCATTACCCAGCTCGGGCCCGTGGTCACCGTGCTGGTGGTGGCGGGCGCGGGTGCGACCGC
CATCTGCGCGGACCTCGGGGCCCGCACCATCCGCGAAGAGATCGACGCGATGCGCGTCCTGGGCATCGACCCGATCCAGC
GCCTCGTGGTGCCGCGCGTGCTGGCCTCGACGTTCGTCGCCCTGCTGCTCAACGGGCTGGTGTGTGCGATCGGCCTGGCG
GGCGGCTACGTGTTCTCGGTCTTCCTGCAGGGGGTGAACCCCGGCGCCTTCATCAACGGTCTGACGGTGCTCACCGGCCT
CGGTGAGCTGGTGCTGGCCGAGATCAAAGCCCTGTTGTTCGGCGTCGTCGCCGGCCTGGTCGGCTGCTATCGCGGGCTGA
CCGTGCAGGGCGGCCCCAAGGGCGTCGGCATCGCGGTCAACGAGACCGTGGTCTACGCCTTCATCTGCCTGTTCGTCATC
AACGTGATCATGACCGCCGTCGGCGTCCGGGTGCTGGTGCGGTAG

Upstream 100 bases:

>100_bases
ATCGTCTGAACCAGGGGTGGGAAGGCCGTCCCGGCAAGATTTCACCGAATCTTCGCCGCGACCGGAGTTCGCAGCACCCC
GCCCGAGAACGGAGCCGAGG

Downstream 100 bases:

>100_bases
CAATTATGGGCCTTCACGCGAAGAGAACGACATCATGAGTTTCGACGCCACGGTTCGACTACGCCGCGCCTTTGGCTGGG
TGCCCGGTGCGGTGGACACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKEQLAAPARAVGGFVEMSIDTFVKTFRRPFQFREFLDQTWMIARVSLIPTLLVAIPFTVLVAFTLNILLREIGAADLSG
AGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLA
GGYVFSVFLQGVNPGAFINGLTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVI
NVIMTAVGVRVLVR

Sequences:

>Translated_254_residues
MKEQLAAPARAVGGFVEMSIDTFVKTFRRPFQFREFLDQTWMIARVSLIPTLLVAIPFTVLVAFTLNILLREIGAADLSG
AGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLA
GGYVFSVFLQGVNPGAFINGLTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVI
NVIMTAVGVRVLVR
>Mature_254_residues
MKEQLAAPARAVGGFVEMSIDTFVKTFRRPFQFREFLDQTWMIARVSLIPTLLVAIPFTVLVAFTLNILLREIGAADLSG
AGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLA
GGYVFSVFLQGVNPGAFINGLTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVI
NVIMTAVGVRVLVR

Specific function: Could be part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=165, Percent_Identity=26.0606060606061, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26648; Mature: 26648

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEQLAAPARAVGGFVEMSIDTFVKTFRRPFQFREFLDQTWMIARVSLIPTLLVAIPFTV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFING
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHH
NVIMTAVGVRVLVR
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKEQLAAPARAVGGFVEMSIDTFVKTFRRPFQFREFLDQTWMIARVSLIPTLLVAIPFTV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAFTLNILLREIGAADLSGAGTAFGTITQLGPVVTVLVVAGAGATAICADLGARTIREE
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IDAMRVLGIDPIQRLVVPRVLASTFVALLLNGLVCAIGLAGGYVFSVFLQGVNPGAFING
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LTVLTGLGELVLAEIKALLFGVVAGLVGCYRGLTVQGGPKGVGIAVNETVVYAFICLFVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHH
NVIMTAVGVRVLVR
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]