Click here to switch to the map view.

The map label for this gene is slyA [C]

Identifier: 108801417

GI number: 108801417

Start: 4736402

End: 4736821

Strand: Reverse

Name: slyA [C]

Synonym: Mmcs_4454

Alternate gene names: 108801417

Gene position: 4736821-4736402 (Counterclockwise)

Preceding gene: 108801418

Following gene: 108801413

Centisome position: 83.02

GC content: 71.9

Gene sequence:

>420_bases
GTGCCGCGTAACCCGCTCGCCGACGAGGTATGGGGTGCGTTGACGGCCCTGGTCTTCGACAACCGCGACAGCTGGCGGCG
CGCGGTGGTCGAGGAGACGGGGTTGCCGTTCAGCCGCGTCCGGGTGTTGCGGCGGCTGGGCCGTCAGCCGATGACGGTGA
AGCAGGTGGCTCAGGCGGCGACGCTGGACGCGCCTGCGGCGACGGTCGCCGTCAACGATCTGGAGGACCGGGGCCTGGTG
GTGCGGGAGGTCGATCCGGCGAACCGCCGCTGCAAGACGGTGTCGCTGACCGATGACGGCCGTGCGGTGCTGGCGACGAT
CGAGGCGATCGACGATCCCGCGCCCGAAGGGCTGGCCGCCCTGGACGACGGCGAACTCGAAGCGTTGCGGGCGACGCTGC
GCAAGCTCACCGGCCGCTGA

Upstream 100 bases:

>100_bases
ACCGCGCTGGCGGTGTACTCCACATCGGGCCGCGCCATGCACTCCGCCGACCGGCTGGCGCCGCTGATCTCGGGAGATGT
GGTGGGGCAGGGGGCGACCC

Downstream 100 bases:

>100_bases
GGCCTCAGACCCGGGTCAGCGTCACGTTGTACAACCGCACCCCGGCGTCGGTCGGTGCGATGTCGACGAAGGTCGGGACG
TCGCGGATCGCGTCACCCTT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; Transcription Regulator Protein MarR

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MPRNPLADEVWGALTALVFDNRDSWRRAVVEETGLPFSRVRVLRRLGRQPMTVKQVAQAATLDAPAATVAVNDLEDRGLV
VREVDPANRRCKTVSLTDDGRAVLATIEAIDDPAPEGLAALDDGELEALRATLRKLTGR

Sequences:

>Translated_139_residues
MPRNPLADEVWGALTALVFDNRDSWRRAVVEETGLPFSRVRVLRRLGRQPMTVKQVAQAATLDAPAATVAVNDLEDRGLV
VREVDPANRRCKTVSLTDDGRAVLATIEAIDDPAPEGLAALDDGELEALRATLRKLTGR
>Mature_138_residues
PRNPLADEVWGALTALVFDNRDSWRRAVVEETGLPFSRVRVLRRLGRQPMTVKQVAQAATLDAPAATVAVNDLEDRGLVV
REVDPANRRCKTVSLTDDGRAVLATIEAIDDPAPEGLAALDDGELEALRATLRKLTGR

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15153; Mature: 15022

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRNPLADEVWGALTALVFDNRDSWRRAVVEETGLPFSRVRVLRRLGRQPMTVKQVAQAA
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH
TLDAPAATVAVNDLEDRGLVVREVDPANRRCKTVSLTDDGRAVLATIEAIDDPAPEGLAA
CCCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCEEHHHHHHHCCCCCCCCEE
LDDGELEALRATLRKLTGR
CCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRNPLADEVWGALTALVFDNRDSWRRAVVEETGLPFSRVRVLRRLGRQPMTVKQVAQAA
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH
TLDAPAATVAVNDLEDRGLVVREVDPANRRCKTVSLTDDGRAVLATIEAIDDPAPEGLAA
CCCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCEEHHHHHHHCCCCCCCCEE
LDDGELEALRATLRKLTGR
CCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA