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The map label for this gene is ycjS [C]

Identifier: 108801363

GI number: 108801363

Start: 4678728

End: 4679681

Strand: Reverse

Name: ycjS [C]

Synonym: Mmcs_4400

Alternate gene names: 108801363

Gene position: 4679681-4678728 (Counterclockwise)

Preceding gene: 108801364

Following gene: 108801362

Centisome position: 82.02

GC content: 70.02

Gene sequence:

>954_bases
GTGAAGGTCCTCGTCATCGGCACCGGTTTCGGAAAGCACGCCGCCGCACCGGCGTACGAGAGCGCCGGATTCGACGTGGA
GGTCGTCAGTCCCCGCGACGAGTCGGCGGTGGCCCGCGGACTCGGATCCGGCGCCGATCTGGTGTCGGTGCACTCACCGC
CGTTCATGCATGTCGACCACGTGTCGGCGGCCCTGGACCGCGGGCTGGCGGTGATGTGCGACAAACCGTTCGGCCGCACC
GCCGACGAAGCCACCGCGATGCGGGACAGGGCACACGCCGTCGGCGTCCCGACCTTCCTCAACTTCGAGTTCCGCTGCCG
CGAATCGTGGGCGAAGGTCAAGGAACTCGCCGACTCCGGCGCGATCGGCACCCCGAACCACCTGAGCTGGAACTGGTTCG
GCAACAGGCTGCGGGGCCGCAGGTACGGATGGATCAACGACGCCGAACTCGGTGGCGGCTGGATCGGCGCCTTCGGATCG
CATCTCATCGACTTCACCCGTTGGTTGTTCGGCAGTGAGATCGTCGACTGCGGCGGTGTCACCCGCATCGACGACCCGAT
GCACGCCGACGCCGACGGGACGCCGCGACAGGCGACCGCCGAGGACGCCTACGCGGCCTGGTTCCGGCTGGCCGACGGCG
CGACGGCCGCGCAGGACACCGGGTTCGCCGCGGCGACGTCGACCCTGCCACGCGCGGTGCTGCTGGGCACGGACGGCTCG
ATCGAACTGACCGCCGACACCACGCTGGTGTTGCGCACCAAGGGTTCCGAACCCGAGACCTTCGAATTCGACCGCCCGGG
CCGGCCCGACCCGGCGCTGGTGACCCTCTTCGGACAGGTCGCCGACGCACTGCGGACGGGCAGCCGGACCACCCCCTCGT
TCGACGACGGACTCGCCGTCGCGCGCGTGATGGACCGATTGCGCGCCAACGCCGTTCGGATGGGCACCCGATGA

Upstream 100 bases:

>100_bases
GCTACAGCCAACCGCTGCGTCGCCTGCCGCTCGGCCTGTCGGCGACGCGGTCGGAGTTGACCCGCCGCGCGGGCCGGCAC
GGGCTGACGGGTCTGTACGC

Downstream 100 bases:

>100_bases
AATACGACCTGCCCGACGAACTGACCGTCACCGCCGACGGGGCGGTGCGCACCGTGCTGATCAACCGGCCCGACGACCTG
AACTGCGTCAACGAGAACCT

Product: oxidoreductase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKVLVIGTGFGKHAAAPAYESAGFDVEVVSPRDESAVARGLGSGADLVSVHSPPFMHVDHVSAALDRGLAVMCDKPFGRT
ADEATAMRDRAHAVGVPTFLNFEFRCRESWAKVKELADSGAIGTPNHLSWNWFGNRLRGRRYGWINDAELGGGWIGAFGS
HLIDFTRWLFGSEIVDCGGVTRIDDPMHADADGTPRQATAEDAYAAWFRLADGATAAQDTGFAAATSTLPRAVLLGTDGS
IELTADTTLVLRTKGSEPETFEFDRPGRPDPALVTLFGQVADALRTGSRTTPSFDDGLAVARVMDRLRANAVRMGTR

Sequences:

>Translated_317_residues
MKVLVIGTGFGKHAAAPAYESAGFDVEVVSPRDESAVARGLGSGADLVSVHSPPFMHVDHVSAALDRGLAVMCDKPFGRT
ADEATAMRDRAHAVGVPTFLNFEFRCRESWAKVKELADSGAIGTPNHLSWNWFGNRLRGRRYGWINDAELGGGWIGAFGS
HLIDFTRWLFGSEIVDCGGVTRIDDPMHADADGTPRQATAEDAYAAWFRLADGATAAQDTGFAAATSTLPRAVLLGTDGS
IELTADTTLVLRTKGSEPETFEFDRPGRPDPALVTLFGQVADALRTGSRTTPSFDDGLAVARVMDRLRANAVRMGTR
>Mature_317_residues
MKVLVIGTGFGKHAAAPAYESAGFDVEVVSPRDESAVARGLGSGADLVSVHSPPFMHVDHVSAALDRGLAVMCDKPFGRT
ADEATAMRDRAHAVGVPTFLNFEFRCRESWAKVKELADSGAIGTPNHLSWNWFGNRLRGRRYGWINDAELGGGWIGAFGS
HLIDFTRWLFGSEIVDCGGVTRIDDPMHADADGTPRQATAEDAYAAWFRLADGATAAQDTGFAAATSTLPRAVLLGTDGS
IELTADTTLVLRTKGSEPETFEFDRPGRPDPALVTLFGQVADALRTGSRTTPSFDDGLAVARVMDRLRANAVRMGTR

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 33940; Mature: 33940

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVIGTGFGKHAAAPAYESAGFDVEVVSPRDESAVARGLGSGADLVSVHSPPFMHVDH
CEEEEEECCCCCCCCCCCHHCCCCEEEEECCCCHHHHHHCCCCCCCEEEECCCCCEEHHH
VSAALDRGLAVMCDKPFGRTADEATAMRDRAHAVGVPTFLNFEFRCRESWAKVKELADSG
HHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECEEEEHHHHHHHHHHHHHCC
AIGTPNHLSWNWFGNRLRGRRYGWINDAELGGGWIGAFGSHLIDFTRWLFGSEIVDCGGV
CCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCC
TRIDDPMHADADGTPRQATAEDAYAAWFRLADGATAAQDTGFAAATSTLPRAVLLGTDGS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCEEEEEECCCC
IELTADTTLVLRTKGSEPETFEFDRPGRPDPALVTLFGQVADALRTGSRTTPSFDDGLAV
EEEEECEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
ARVMDRLRANAVRMGTR
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKVLVIGTGFGKHAAAPAYESAGFDVEVVSPRDESAVARGLGSGADLVSVHSPPFMHVDH
CEEEEEECCCCCCCCCCCHHCCCCEEEEECCCCHHHHHHCCCCCCCEEEECCCCCEEHHH
VSAALDRGLAVMCDKPFGRTADEATAMRDRAHAVGVPTFLNFEFRCRESWAKVKELADSG
HHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECEEEEHHHHHHHHHHHHHCC
AIGTPNHLSWNWFGNRLRGRRYGWINDAELGGGWIGAFGSHLIDFTRWLFGSEIVDCGGV
CCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCC
TRIDDPMHADADGTPRQATAEDAYAAWFRLADGATAAQDTGFAAATSTLPRAVLLGTDGS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCEEEEEECCCC
IELTADTTLVLRTKGSEPETFEFDRPGRPDPALVTLFGQVADALRTGSRTTPSFDDGLAV
EEEEECEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
ARVMDRLRANAVRMGTR
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]