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The map label for this gene is ytcJ [H]

Identifier: 108801333

GI number: 108801333

Start: 4649372

End: 4651018

Strand: Reverse

Name: ytcJ [H]

Synonym: Mmcs_4369

Alternate gene names: 108801333

Gene position: 4651018-4649372 (Counterclockwise)

Preceding gene: 108801338

Following gene: 108801332

Centisome position: 81.52

GC content: 72.74

Gene sequence:

>1647_bases
GTGGCAGCGACCCTGTTCCGGAACGGGACGATCTGGACCGGTACGTCAGAATCCGTCGCCGAGGCGCTGCTGGTGGTCGA
CGGCGCCGTCGCCGCGGTCGGTGCGGACGCCACCGCCCGCACGGCCGACGAGGAGGTCGACCTCGACGGCGGGTTCCTGA
TGCCGTCGTTCGGTGACGGCCACGCCCACCCGCTGCTCGGTGGCCTGGAGGAGGTCGGCCCGCCGGTCCGTGGCTGCGGT
TCGGTGGACGAGATCGTCGAGGCGGTGCGCGGGTACGCCGAGCGCCACCCCGAGGCCGAGTGGATCGTCGGCGCCTCCTA
CGACGGCAGCCTCGCCGAAGGTGGACTGTTCGACGCGCGCTGGCTCGACGCGGCGGTGCCGGACCGCCCGGTCGTGCTGC
GGGCCTGGGACTACCACACGGTGTGGTGCAACTCGGTGGCCCTGCAGCGCGCCGGCATCACCGCCGACACCCCCGACCCG
GTGCTGGGGGAGATCCCGCACCGCGAGGACGGGTCGGTGCTCGGCACGCTGCGCGAGTGGGGTGCCGTCGACCTCGTCAC
CGCGGTGATGCCCGAACGCGATGAGGACATCCGGGTGGCCGCGCTCGGCACCGCGGCCGACTACTACCTCGCCCGCGGCG
TGACGTGGGTGCAGGACGCGTGGGTCGAACCCGGCGACGTCGAGACCTACCTCGCCGCCGCCCGTCGCGACGCGCTGCGC
ATCCGGTTCAACCTCGCGCTCTACGCCGATCCCCGGCACTTCGACGCCCAGCTGCCGCAGTTCGCCGAGGCCCGTCGCCG
TGTCGACGAGCTGGCCGCCCCGCTGTTGACCGCGCAGACCGTGAAGTTCTTCGCCGACGGGGTGGTGGAGAACGAGACCG
GTGCGTTGATCGAGCCGTACTGCTCGGGGCTGCACAACCATTCCAGGGGGCAGGAGCGTAGCGACCCGGGGGACAAACGG
GGCATGCAGGTGTGGGAGGGCGATTCGCTGGCCGAATCCGTGCGCCGCGTCGACGAACTCGGCTTCCAGATCCACATCCA
CGCCATCGGCGACGCGGCGGTCCGCCAGGCCCTCGACGCCATCGAACACGCGATCACCGTCAACGGTCCGCGGGACCGCC
GCCCCGTCATCGCCCACGCCCAACTCGTCGACGACGCCGACATCGACCGCTTCGCCCGGCTCGGCGTGATCGCGAACATG
CAGCCGCTGTGGGCGCAGCTCGATCCGTTGATGACGGTGCTGACCGTGCCGCGGCTGGGCCCCGAACGCGCCGACCGGCA
GTACCGGATGCGCACGCTCGACGAGGCCGGCGTGCTGGCCTTCGGATCGGACTGGCCGGTGTCCTCGGGCGCCCCGCTGG
ACGGGATCGCCGTCGCGGCGTCGCGGCGCACTGTCGACGGCACCCCGGAGGGTGGCTGGACCCCGCAGGAGATCGTGCCG
GTCGAACGGGCCATGCGGGCCTACACCGCGGGCGTCGCGCGCCAGGCGTTCGCCGAAGAGCGGTGGGGCAGGCTCACTCC
GGGCGCCAGTGCGGACCTGGTGTGGCTGAGCGCCGACCCGAGATCGACGCCCGCGCTGGAGATTCCGGCGATCGAGGTGC
GCGGAACGTGTCTGGCGGGCAAGCTCGTAGGGCCGTCGGCCCGCTGA

Upstream 100 bases:

>100_bases
CAGGTGGGTGACGCGGGTCCGGTACAGCGCGGGCGTCGTTTTCGGTTCCACATCCTTCATTCGGAGCCGATGCGCGGATG
GATGGTTATAGTTCCCTGCC

Downstream 100 bases:

>100_bases
AGGGAGTTCTCATGTCCTCGACCACACCCCTGAACCCGTCCGTCGGGGAGGGTGAGGGACAGCTTCGCCGCGTGCTCGGC
GTGCCGTCCCTGGTGCTGTT

Product: amidohydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MAATLFRNGTIWTGTSESVAEALLVVDGAVAAVGADATARTADEEVDLDGGFLMPSFGDGHAHPLLGGLEEVGPPVRGCG
SVDEIVEAVRGYAERHPEAEWIVGASYDGSLAEGGLFDARWLDAAVPDRPVVLRAWDYHTVWCNSVALQRAGITADTPDP
VLGEIPHREDGSVLGTLREWGAVDLVTAVMPERDEDIRVAALGTAADYYLARGVTWVQDAWVEPGDVETYLAAARRDALR
IRFNLALYADPRHFDAQLPQFAEARRRVDELAAPLLTAQTVKFFADGVVENETGALIEPYCSGLHNHSRGQERSDPGDKR
GMQVWEGDSLAESVRRVDELGFQIHIHAIGDAAVRQALDAIEHAITVNGPRDRRPVIAHAQLVDDADIDRFARLGVIANM
QPLWAQLDPLMTVLTVPRLGPERADRQYRMRTLDEAGVLAFGSDWPVSSGAPLDGIAVAASRRTVDGTPEGGWTPQEIVP
VERAMRAYTAGVARQAFAEERWGRLTPGASADLVWLSADPRSTPALEIPAIEVRGTCLAGKLVGPSAR

Sequences:

>Translated_548_residues
MAATLFRNGTIWTGTSESVAEALLVVDGAVAAVGADATARTADEEVDLDGGFLMPSFGDGHAHPLLGGLEEVGPPVRGCG
SVDEIVEAVRGYAERHPEAEWIVGASYDGSLAEGGLFDARWLDAAVPDRPVVLRAWDYHTVWCNSVALQRAGITADTPDP
VLGEIPHREDGSVLGTLREWGAVDLVTAVMPERDEDIRVAALGTAADYYLARGVTWVQDAWVEPGDVETYLAAARRDALR
IRFNLALYADPRHFDAQLPQFAEARRRVDELAAPLLTAQTVKFFADGVVENETGALIEPYCSGLHNHSRGQERSDPGDKR
GMQVWEGDSLAESVRRVDELGFQIHIHAIGDAAVRQALDAIEHAITVNGPRDRRPVIAHAQLVDDADIDRFARLGVIANM
QPLWAQLDPLMTVLTVPRLGPERADRQYRMRTLDEAGVLAFGSDWPVSSGAPLDGIAVAASRRTVDGTPEGGWTPQEIVP
VERAMRAYTAGVARQAFAEERWGRLTPGASADLVWLSADPRSTPALEIPAIEVRGTCLAGKLVGPSAR
>Mature_547_residues
AATLFRNGTIWTGTSESVAEALLVVDGAVAAVGADATARTADEEVDLDGGFLMPSFGDGHAHPLLGGLEEVGPPVRGCGS
VDEIVEAVRGYAERHPEAEWIVGASYDGSLAEGGLFDARWLDAAVPDRPVVLRAWDYHTVWCNSVALQRAGITADTPDPV
LGEIPHREDGSVLGTLREWGAVDLVTAVMPERDEDIRVAALGTAADYYLARGVTWVQDAWVEPGDVETYLAAARRDALRI
RFNLALYADPRHFDAQLPQFAEARRRVDELAAPLLTAQTVKFFADGVVENETGALIEPYCSGLHNHSRGQERSDPGDKRG
MQVWEGDSLAESVRRVDELGFQIHIHAIGDAAVRQALDAIEHAITVNGPRDRRPVIAHAQLVDDADIDRFARLGVIANMQ
PLWAQLDPLMTVLTVPRLGPERADRQYRMRTLDEAGVLAFGSDWPVSSGAPLDGIAVAASRRTVDGTPEGGWTPQEIVPV
ERAMRAYTAGVARQAFAEERWGRLTPGASADLVWLSADPRSTPALEIPAIEVRGTCLAGKLVGPSAR

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 59106; Mature: 58975

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATLFRNGTIWTGTSESVAEALLVVDGAVAAVGADATARTADEEVDLDGGFLMPSFGDG
CCCEEEECCEEECCCCHHHHHHHHHHCCHHHEECCCCHHCCCCCCCCCCCCEECCCCCCC
HAHPLLGGLEEVGPPVRGCGSVDEIVEAVRGYAERHPEAEWIVGASYDGSLAEGGLFDAR
CCCHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHH
WLDAAVPDRPVVLRAWDYHTVWCNSVALQRAGITADTPDPVLGEIPHREDGSVLGTLREW
HHHCCCCCCCEEEEECCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
GAVDLVTAVMPERDEDIRVAALGTAADYYLARGVTWVQDAWVEPGDVETYLAAARRDALR
CHHHHHHHHCCCCCCCEEEEEECCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHCCEEE
IRFNLALYADPRHFDAQLPQFAEARRRVDELAAPLLTAQTVKFFADGVVENETGALIEPY
EEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHH
CSGLHNHSRGQERSDPGDKRGMQVWEGDSLAESVRRVDELGFQIHIHAIGDAAVRQALDA
HHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
IEHAITVNGPRDRRPVIAHAQLVDDADIDRFARLGVIANMQPLWAQLDPLMTVLTVPRLG
HHHEEECCCCCCCCCEEEEEHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
PERADRQYRMRTLDEAGVLAFGSDWPVSSGAPLDGIAVAASRRTVDGTPEGGWTPQEIVP
HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHH
VERAMRAYTAGVARQAFAEERWGRLTPGASADLVWLSADPRSTPALEIPAIEVRGTCLAG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEECCEEEECCEEEEC
KLVGPSAR
CCCCCCCC
>Mature Secondary Structure 
AATLFRNGTIWTGTSESVAEALLVVDGAVAAVGADATARTADEEVDLDGGFLMPSFGDG
CCEEEECCEEECCCCHHHHHHHHHHCCHHHEECCCCHHCCCCCCCCCCCCEECCCCCCC
HAHPLLGGLEEVGPPVRGCGSVDEIVEAVRGYAERHPEAEWIVGASYDGSLAEGGLFDAR
CCCHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHH
WLDAAVPDRPVVLRAWDYHTVWCNSVALQRAGITADTPDPVLGEIPHREDGSVLGTLREW
HHHCCCCCCCEEEEECCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
GAVDLVTAVMPERDEDIRVAALGTAADYYLARGVTWVQDAWVEPGDVETYLAAARRDALR
CHHHHHHHHCCCCCCCEEEEEECCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHCCEEE
IRFNLALYADPRHFDAQLPQFAEARRRVDELAAPLLTAQTVKFFADGVVENETGALIEPY
EEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHH
CSGLHNHSRGQERSDPGDKRGMQVWEGDSLAESVRRVDELGFQIHIHAIGDAAVRQALDA
HHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
IEHAITVNGPRDRRPVIAHAQLVDDADIDRFARLGVIANMQPLWAQLDPLMTVLTVPRLG
HHHEEECCCCCCCCCEEEEEHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
PERADRQYRMRTLDEAGVLAFGSDWPVSSGAPLDGIAVAASRRTVDGTPEGGWTPQEIVP
HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHH
VERAMRAYTAGVARQAFAEERWGRLTPGASADLVWLSADPRSTPALEIPAIEVRGTCLAG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEECCEEEECCEEEEC
KLVGPSAR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]