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The map label for this gene is deoR [H]

Identifier: 108801322

GI number: 108801322

Start: 4638243

End: 4639262

Strand: Reverse

Name: deoR [H]

Synonym: Mmcs_4358

Alternate gene names: 108801322

Gene position: 4639262-4638243 (Counterclockwise)

Preceding gene: 108801332

Following gene: 108801321

Centisome position: 81.31

GC content: 70.98

Gene sequence:

>1020_bases
GTGGCGATACCGACGTCAACTCCCGCAGCGAACGGCCGGGCGTCGCAACGCTCGCCGGAGGACCTGCGGTTGGCGCTGCG
TGCGGCCACGCTGTACTACCTCGACGGCCTCACCCAGGCCGAGATCGCCGGCCGCCTCGGGGTCTCCCGTCCCACCGCCG
GCCGACTCGTCGCGCGCGCCAAAGCCCGCGGCCTCGTGCGGATCGACATCGTGGTCCCGCCGGACCTGCAGGATGATCTG
CACGCCGACGAGGAACGCGAACTCGAGGTGCGCTTCGGCCTCACCGAGGTGGTGATCGCCGGCCACGGCGTCGACATCGG
TGCACCCGGGCGGCCCGCCGCGTACGCCAGCGTCGGGCGCGCGGCCGCCGCGCTGCTGATGCGCCGACTGGAGGCCGACG
ATGTCCTGGGCTTCACCTGGGGGCCCGAACAGGTGGCTGTCGCGACCGCGCTGACACCGGGAATGGCGACCTGCCGCGCG
GTGGTGCAACTCGACGGCGCCATGTCCAGCGCCGCCTATCAGACCGGCGTCGAGCTGATCCTCGGCCGATGCGCGGACAT
ACTGCACGCCAACACCATTCGCCTGCCGGCACCGCTCTACGCCGATCCGTCCACCGTCGCATCCATGCGCAGCGACTCGG
TCATCTCCCGCACATTGGAGGCGGGCCGGCGCGCCGACGTGATGATGTTCGGGGTCGGTGCGGTCTCGACCTCGACCACC
CTGTTCGAGGGCAGCTACCTCGACACCCGGATGCTCGACGAGCAGATCGCCGCCGGTGCGGTCGGTGAGATCGGGGGCCG
GTTCTTCGACGAGCGCGGCGTCCCCGTCGACACCGAACTCCAGCAGCGCGCGGTGTCCGTTCCGCTCGAGGACGTCCGGG
CCTGCGAGAAGACGATCCTGATCGCCAGCGGCGCCGAGAAACACCGGGCCACCCTCGCCGCGCTCCGCGGCCGGTTGGCC
CGGATGTTGGTTTGCGACGTCGACTGTGCACGTTGGCTTCTCGACCACGGAAAGGGGTGA

Upstream 100 bases:

>100_bases
AGAAAAGTGTTGTCTGCGTCACATTCACCATGTTAGCGTGATGAGCATCTACTCGCGCCAGTGAGCATCTGCTCACGGCA
ATCCGAGAGGTAGGTGGCGC

Downstream 100 bases:

>100_bases
CGGTGAAAGTTCAGACAATAGCGCGCCGGCTGGCGGGAGGTCTGGCCGCTGCCGGGCTGGTGTTCACGTCCGGCTGTTCC
GGGGCCGGCAGCCTCGGATC

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MAIPTSTPAANGRASQRSPEDLRLALRAATLYYLDGLTQAEIAGRLGVSRPTAGRLVARAKARGLVRIDIVVPPDLQDDL
HADEERELEVRFGLTEVVIAGHGVDIGAPGRPAAYASVGRAAAALLMRRLEADDVLGFTWGPEQVAVATALTPGMATCRA
VVQLDGAMSSAAYQTGVELILGRCADILHANTIRLPAPLYADPSTVASMRSDSVISRTLEAGRRADVMMFGVGAVSTSTT
LFEGSYLDTRMLDEQIAAGAVGEIGGRFFDERGVPVDTELQQRAVSVPLEDVRACEKTILIASGAEKHRATLAALRGRLA
RMLVCDVDCARWLLDHGKG

Sequences:

>Translated_339_residues
MAIPTSTPAANGRASQRSPEDLRLALRAATLYYLDGLTQAEIAGRLGVSRPTAGRLVARAKARGLVRIDIVVPPDLQDDL
HADEERELEVRFGLTEVVIAGHGVDIGAPGRPAAYASVGRAAAALLMRRLEADDVLGFTWGPEQVAVATALTPGMATCRA
VVQLDGAMSSAAYQTGVELILGRCADILHANTIRLPAPLYADPSTVASMRSDSVISRTLEAGRRADVMMFGVGAVSTSTT
LFEGSYLDTRMLDEQIAAGAVGEIGGRFFDERGVPVDTELQQRAVSVPLEDVRACEKTILIASGAEKHRATLAALRGRLA
RMLVCDVDCARWLLDHGKG
>Mature_338_residues
AIPTSTPAANGRASQRSPEDLRLALRAATLYYLDGLTQAEIAGRLGVSRPTAGRLVARAKARGLVRIDIVVPPDLQDDLH
ADEERELEVRFGLTEVVIAGHGVDIGAPGRPAAYASVGRAAAALLMRRLEADDVLGFTWGPEQVAVATALTPGMATCRAV
VQLDGAMSSAAYQTGVELILGRCADILHANTIRLPAPLYADPSTVASMRSDSVISRTLEAGRRADVMMFGVGAVSTSTTL
FEGSYLDTRMLDEQIAAGAVGEIGGRFFDERGVPVDTELQQRAVSVPLEDVRACEKTILIASGAEKHRATLAALRGRLAR
MLVCDVDCARWLLDHGKG

Specific function: Negative regulator of the dra-nupC-pdp operon. DeoR binds cooperatively to the operator DNA, which consists of a palindrome and a direct repeat sequence located 3' to the palindrome [H]

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI87082414, Length=311, Percent_Identity=28.6173633440514, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787791, Length=316, Percent_Identity=29.4303797468354, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR007630
- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04545 Sigma70_r4; PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 35955; Mature: 35823

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPTSTPAANGRASQRSPEDLRLALRAATLYYLDGLTQAEIAGRLGVSRPTAGRLVARA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHH
KARGLVRIDIVVPPDLQDDLHADEERELEVRFGLTEVVIAGHGVDIGAPGRPAAYASVGR
HHCCEEEEEEEECCCCCHHCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHH
AAAALLMRRLEADDVLGFTWGPEQVAVATALTPGMATCRAVVQLDGAMSSAAYQTGVELI
HHHHHHHHHHCCCCEEEECCCCHHEEEEHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH
LGRCADILHANTIRLPAPLYADPSTVASMRSDSVISRTLEAGRRADVMMFGVGAVSTSTT
HHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCE
LFEGSYLDTRMLDEQIAAGAVGEIGGRFFDERGVPVDTELQQRAVSVPLEDVRACEKTIL
EEECCCCHHHHHHHHHHCCCHHHHCCHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHEEE
IASGAEKHRATLAALRGRLARMLVCDVDCARWLLDHGKG
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AIPTSTPAANGRASQRSPEDLRLALRAATLYYLDGLTQAEIAGRLGVSRPTAGRLVARA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHH
KARGLVRIDIVVPPDLQDDLHADEERELEVRFGLTEVVIAGHGVDIGAPGRPAAYASVGR
HHCCEEEEEEEECCCCCHHCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHH
AAAALLMRRLEADDVLGFTWGPEQVAVATALTPGMATCRAVVQLDGAMSSAAYQTGVELI
HHHHHHHHHHCCCCEEEECCCCHHEEEEHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH
LGRCADILHANTIRLPAPLYADPSTVASMRSDSVISRTLEAGRRADVMMFGVGAVSTSTT
HHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCE
LFEGSYLDTRMLDEQIAAGAVGEIGGRFFDERGVPVDTELQQRAVSVPLEDVRACEKTIL
EEECCCCHHHHHHHHHHCCCHHHHCCHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHEEE
IASGAEKHRATLAALRGRLARMLVCDVDCARWLLDHGKG
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8550462; 8867804; 9384377; 10074062; 10714997 [H]