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The map label for this gene is 108801315

Identifier: 108801315

GI number: 108801315

Start: 4628982

End: 4630505

Strand: Reverse

Name: 108801315

Synonym: Mmcs_4351

Alternate gene names: NA

Gene position: 4630505-4628982 (Counterclockwise)

Preceding gene: 108801316

Following gene: 108801312

Centisome position: 81.16

GC content: 67.32

Gene sequence:

>1524_bases
ATGTATGTTCGAGGTATGTCAGGGCACGACCTCCAGGCCGCGGTGACCGCGCTGCGTGCGGCTTTCGATGAGGTGGCCTC
CTGTGATGTCGCCTTGTTGGACCGCGCCGAACTCGTTGCGGCGCTGGATGAACTCGAGGCCCTGGGATGCCGGTTGCCCA
CGATGAGCCACCGCTTGCTGGCCCGTCTGCGCTCCGAGGCGACACCGCAGCAGATGGGCGCCAAGTCGTGGAGAGAGGTG
CTGACGGTCCGCTGGCGGATCTCGGGCAGTGAGGCGAATCGACGACTCACCGAGGCCGGTCTGCTGGCGCCGCGCCAGGC
ATTGACCGGTCCTTCGCTGCCGCCGGTGTTGCCCGCAACGGCGGCAGCACAGGCGCACGGGTTGATCAACAGCGAACACG
TCGAGGTCATCCGCAGAGCGGTCGACAAGTTGCCGGGGTTCGTCGACACCGTCACGCGGGAGCAGTTCGAGGTCACCCTG
GTCCGCACCGCGGTGGGCGTGGGCCCCAAGGAACTCAAGGACGCGGCCGACCTCACGTTGTTCCTGCTCGATCAGGACGG
TCCCGAGCCCGATGACACCGAACGGGCCCGCAAGCGTGGCGTGTCGAGATCGAAACAACGCCCCGACGGGATGGTCGAGC
TGTCCGGGCACCTGACGCCGGAAGCGTGGGCGGTGTGGGAGGTGATCTTCGCGAAGTACGCGGCGCCGGGCATGTGCAAT
CCCGACGATCCCGAACCCTGCACCTCGGGTGCTCCGTCGCAGGAGCAGATCGACAACGACCACCGCACCCTGGCCCAGCG
TCAACACGATGCGATGGTCGCGATCGGGCGCATCGCCTTGATGAGTGGCGAACTCGGCCAACTGAATGGGCTGCCGGTCT
CGATCATCATCCGCACCACGCTGGAGGATCTGGAGTCCCGCGCCGGGGTCGGCACCACCGGTGGCGGCACCGTCGTGCCG
ATCGCCGATGTGATCCGGATGGCCGGCCACGCCAACCACTACCTGGCGGTGTTCGACGGAGCTACCGGATCTGCTCTTGA
TCTGTTCCGCGCCAAGCGGACTGCCTCGGCTGCGCAACGCATCATGCTGATCGCGCGCGATGGCGGATGCACCAAACCGT
GTTGCACTGTCGGCGCCTACGGCTGCCAGGTGCATCATGTGGATGCCGACTGGTCAGACGGCGGCAACACCAACGTCGAC
GAACTCGGGCTCGCGTGCGGGCCGGACAACCGTAGCGTCGACAAAGACGGCGGCTGGTCCACCCGCATGAACGATCAGTG
CGAAGTCGAATGGATCCCGCCGCCACGGCTGGACACAGGCCAAGCCCGGTTGAACCACTACCACCGACCCGAACGCCTTC
TCCGGCCATCCGACGACCCTGTGCCTACGAGCCAGGACCGCAGTGGGGCAATCGAACCCGCCGACGGTGGGAAGGTCGGC
GACGCCGAGTCTGGTCCTCCGCGGTCGGCCGACGACACCGGCGAACCCGGCGGGCCCGCACCGCCCGGCAATCGTGCGGC
CTGA

Upstream 100 bases:

>100_bases
TCCTGGCGGGGGCTGCGACCGGACAAGACGCCGGACGACGTCGTGTGGGAGTAGGTGCGGTCGATGTCGCATCGAGCGGT
GTGGATTTGTCGGTGGTCGA

Downstream 100 bases:

>100_bases
TCGCCGTCACCCGCGTATGCGCCTCGAGTCACAACGGACGCCACCTCGAGTGGGGCGACGATCCGGCTGAGGCGCCACTT
CAGGGTGTCGCGCTCCCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MYVRGMSGHDLQAAVTALRAAFDEVASCDVALLDRAELVAALDELEALGCRLPTMSHRLLARLRSEATPQQMGAKSWREV
LTVRWRISGSEANRRLTEAGLLAPRQALTGPSLPPVLPATAAAQAHGLINSEHVEVIRRAVDKLPGFVDTVTREQFEVTL
VRTAVGVGPKELKDAADLTLFLLDQDGPEPDDTERARKRGVSRSKQRPDGMVELSGHLTPEAWAVWEVIFAKYAAPGMCN
PDDPEPCTSGAPSQEQIDNDHRTLAQRQHDAMVAIGRIALMSGELGQLNGLPVSIIIRTTLEDLESRAGVGTTGGGTVVP
IADVIRMAGHANHYLAVFDGATGSALDLFRAKRTASAAQRIMLIARDGGCTKPCCTVGAYGCQVHHVDADWSDGGNTNVD
ELGLACGPDNRSVDKDGGWSTRMNDQCEVEWIPPPRLDTGQARLNHYHRPERLLRPSDDPVPTSQDRSGAIEPADGGKVG
DAESGPPRSADDTGEPGGPAPPGNRAA

Sequences:

>Translated_507_residues
MYVRGMSGHDLQAAVTALRAAFDEVASCDVALLDRAELVAALDELEALGCRLPTMSHRLLARLRSEATPQQMGAKSWREV
LTVRWRISGSEANRRLTEAGLLAPRQALTGPSLPPVLPATAAAQAHGLINSEHVEVIRRAVDKLPGFVDTVTREQFEVTL
VRTAVGVGPKELKDAADLTLFLLDQDGPEPDDTERARKRGVSRSKQRPDGMVELSGHLTPEAWAVWEVIFAKYAAPGMCN
PDDPEPCTSGAPSQEQIDNDHRTLAQRQHDAMVAIGRIALMSGELGQLNGLPVSIIIRTTLEDLESRAGVGTTGGGTVVP
IADVIRMAGHANHYLAVFDGATGSALDLFRAKRTASAAQRIMLIARDGGCTKPCCTVGAYGCQVHHVDADWSDGGNTNVD
ELGLACGPDNRSVDKDGGWSTRMNDQCEVEWIPPPRLDTGQARLNHYHRPERLLRPSDDPVPTSQDRSGAIEPADGGKVG
DAESGPPRSADDTGEPGGPAPPGNRAA
>Mature_507_residues
MYVRGMSGHDLQAAVTALRAAFDEVASCDVALLDRAELVAALDELEALGCRLPTMSHRLLARLRSEATPQQMGAKSWREV
LTVRWRISGSEANRRLTEAGLLAPRQALTGPSLPPVLPATAAAQAHGLINSEHVEVIRRAVDKLPGFVDTVTREQFEVTL
VRTAVGVGPKELKDAADLTLFLLDQDGPEPDDTERARKRGVSRSKQRPDGMVELSGHLTPEAWAVWEVIFAKYAAPGMCN
PDDPEPCTSGAPSQEQIDNDHRTLAQRQHDAMVAIGRIALMSGELGQLNGLPVSIIIRTTLEDLESRAGVGTTGGGTVVP
IADVIRMAGHANHYLAVFDGATGSALDLFRAKRTASAAQRIMLIARDGGCTKPCCTVGAYGCQVHHVDADWSDGGNTNVD
ELGLACGPDNRSVDKDGGWSTRMNDQCEVEWIPPPRLDTGQARLNHYHRPERLLRPSDDPVPTSQDRSGAIEPADGGKVG
DAESGPPRSADDTGEPGGPAPPGNRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003870
- InterPro:   IPR003615 [H]

Pfam domain/function: PF02720 DUF222 [H]

EC number: NA

Molecular weight: Translated: 54144; Mature: 54144

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVRGMSGHDLQAAVTALRAAFDEVASCDVALLDRAELVAALDELEALGCRLPTMSHRLL
CEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ARLRSEATPQQMGAKSWREVLTVRWRISGSEANRRLTEAGLLAPRQALTGPSLPPVLPAT
HHHHHCCCHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHH
AAAQAHGLINSEHVEVIRRAVDKLPGFVDTVTREQFEVTLVRTAVGVGPKELKDAADLTL
HHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEHHHHCCCHHHHHHHCCEEE
FLLDQDGPEPDDTERARKRGVSRSKQRPDGMVELSGHLTPEAWAVWEVIFAKYAAPGMCN
EEEECCCCCCCHHHHHHHHCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCC
PDDPEPCTSGAPSQEQIDNDHRTLAQRQHDAMVAIGRIALMSGELGQLNGLPVSIIIRTT
CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEHHH
LEDLESRAGVGTTGGGTVVPIADVIRMAGHANHYLAVFDGATGSALDLFRAKRTASAAQR
HHHHHHHCCCCCCCCCCEECHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHE
IMLIARDGGCTKPCCTVGAYGCQVHHVDADWSDGGNTNVDELGLACGPDNRSVDKDGGWS
EEEEECCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHCCCEECCCCCCCCCCCCCC
TRMNDQCEVEWIPPPRLDTGQARLNHYHRPERLLRPSDDPVPTSQDRSGAIEPADGGKVG
CCCCCCEEEEECCCCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
DAESGPPRSADDTGEPGGPAPPGNRAA
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYVRGMSGHDLQAAVTALRAAFDEVASCDVALLDRAELVAALDELEALGCRLPTMSHRLL
CEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ARLRSEATPQQMGAKSWREVLTVRWRISGSEANRRLTEAGLLAPRQALTGPSLPPVLPAT
HHHHHCCCHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHH
AAAQAHGLINSEHVEVIRRAVDKLPGFVDTVTREQFEVTLVRTAVGVGPKELKDAADLTL
HHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEHHHHCCCHHHHHHHCCEEE
FLLDQDGPEPDDTERARKRGVSRSKQRPDGMVELSGHLTPEAWAVWEVIFAKYAAPGMCN
EEEECCCCCCCHHHHHHHHCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCC
PDDPEPCTSGAPSQEQIDNDHRTLAQRQHDAMVAIGRIALMSGELGQLNGLPVSIIIRTT
CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEHHH
LEDLESRAGVGTTGGGTVVPIADVIRMAGHANHYLAVFDGATGSALDLFRAKRTASAAQR
HHHHHHHCCCCCCCCCCEECHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHE
IMLIARDGGCTKPCCTVGAYGCQVHHVDADWSDGGNTNVDELGLACGPDNRSVDKDGGWS
EEEEECCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHCCCEECCCCCCCCCCCCCC
TRMNDQCEVEWIPPPRLDTGQARLNHYHRPERLLRPSDDPVPTSQDRSGAIEPADGGKVG
CCCCCCEEEEECCCCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
DAESGPPRSADDTGEPGGPAPPGNRAA
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]