| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is ssuD [H]
Identifier: 108801287
GI number: 108801287
Start: 4596096
End: 4597265
Strand: Reverse
Name: ssuD [H]
Synonym: Mmcs_4323
Alternate gene names: 108801287
Gene position: 4597265-4596096 (Counterclockwise)
Preceding gene: 108801289
Following gene: 108801286
Centisome position: 80.58
GC content: 66.24
Gene sequence:
>1170_bases ATGGGTGACGGCGGTCGCGGCGGTTGCTGCCATGGATCCATGAGCACCGAACGCATCGCCGACCACGTCAAGTTCGCCTA CTGGGTGCCCAACGTCAGTGGCGGCCTGGTGACCAGCACCATCGAACAGCGCACCGACTGGAACTACGAGTACAACAAGA AACTCGCCCAGACCGCGGAGAACAACGGCTTCGAATACGCGTTGAGCCAGGTCCGCTACGAAGCCAGCTACGGCGCCGAA TACCAGCACGAATCGACCAGCTTCAGCCTGGCGCTGCTGCTGGCCACCGAGCGGCTCAAGGTGATCGCCGCCGTGCACCC GGGCCTCTGGCAGCCCGCGGTGCTCGCCAAGCTCGGCGCCACCGCCGACCAGCTGTCGGGCGGCCGGTTTGCCGTCAACG TCGTCTCCGGCTGGTTCAAGGACGAGTTCACCCACCTCGGCGAGCCGTGGCTCGAACACGACGAGCGCTACCGCCGCAGC GCCGAGTTCCTGCAGGTGCTGCGCAAGATCTGGACCGAGGACGACGTGGACTTCCGCGGCGACTTCTACCGCATCCACGA CTTCACCCTCAAGCCGAAACCGGTCAACACACCCGAGCGGCCCAACCCGGAGCTCTTCCAGGGCGGCAACTCCACCGCCG CGCGGCGCAACGGCGGCCGCTACGCCGACTGGTACTTCTCCAACGGCAAGGACTTCGACGGCATCACCGAACAGATCGTC GAGGTGCGTGACCATGCCCGTGAGGTGGGCCGCGAGGTCAAGGTCGGACTGAACGGGTTCATCATCGCCCGCGACACCGA GAAGGAGGCGAGGGACACCCTCCGGGAGATCATCGAGAAGGCCGACAAGCCGGCCGTCGAGGGCTTCCGCAGCGCCGTCC AGCAGGCCGGGAACTCGACGGCCGACAAGAAGGGAATGTGGGCGGATTCCTCCTTCGAGGATCTGGTCCAGTACAACGAC GGCTTCCGCACCCAGCTGATCGGCACGCCCGAGCAGATCGCGGAACGCATTGCGGCATACCGCAAACGCGGTGTCGACCT GATCCTCGGCGGCTTCCTGCACTTCCAGGAGGAGATCGAGTACTTCGGTGCCCGGGTGCTGCCGCTCGTGCGCGAGATCG AGGCATCCGATGCCTCCTCGGCCGACGCCCCGGCGCTCGCCACGGTGTGA
Upstream 100 bases:
>100_bases ACCGCGGTCACTGGTGAAGAGTACGAGCCCGAAGTCCATGCAGGAATTAGAACGTGTTCTAGTAAGAAGGGCAAGCACGG ATAAGTTCACCGCGATCCAT
Downstream 100 bases:
>100_bases CGCCGCAACGGCACAGGGGTTAGACACCGTCGTGCGCCGGGTACGAGCGTGGGTGCGCTAGCGTGGGAGAGCGAATTGCT CAGGTGGTCCGTGTTCATGC
Product: alkanesulfonate monooxygenase
Products: NA
Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase [H]
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MGDGGRGGCCHGSMSTERIADHVKFAYWVPNVSGGLVTSTIEQRTDWNYEYNKKLAQTAENNGFEYALSQVRYEASYGAE YQHESTSFSLALLLATERLKVIAAVHPGLWQPAVLAKLGATADQLSGGRFAVNVVSGWFKDEFTHLGEPWLEHDERYRRS AEFLQVLRKIWTEDDVDFRGDFYRIHDFTLKPKPVNTPERPNPELFQGGNSTAARRNGGRYADWYFSNGKDFDGITEQIV EVRDHAREVGREVKVGLNGFIIARDTEKEARDTLREIIEKADKPAVEGFRSAVQQAGNSTADKKGMWADSSFEDLVQYND GFRTQLIGTPEQIAERIAAYRKRGVDLILGGFLHFQEEIEYFGARVLPLVREIEASDASSADAPALATV
Sequences:
>Translated_389_residues MGDGGRGGCCHGSMSTERIADHVKFAYWVPNVSGGLVTSTIEQRTDWNYEYNKKLAQTAENNGFEYALSQVRYEASYGAE YQHESTSFSLALLLATERLKVIAAVHPGLWQPAVLAKLGATADQLSGGRFAVNVVSGWFKDEFTHLGEPWLEHDERYRRS AEFLQVLRKIWTEDDVDFRGDFYRIHDFTLKPKPVNTPERPNPELFQGGNSTAARRNGGRYADWYFSNGKDFDGITEQIV EVRDHAREVGREVKVGLNGFIIARDTEKEARDTLREIIEKADKPAVEGFRSAVQQAGNSTADKKGMWADSSFEDLVQYND GFRTQLIGTPEQIAERIAAYRKRGVDLILGGFLHFQEEIEYFGARVLPLVREIEASDASSADAPALATV >Mature_388_residues GDGGRGGCCHGSMSTERIADHVKFAYWVPNVSGGLVTSTIEQRTDWNYEYNKKLAQTAENNGFEYALSQVRYEASYGAEY QHESTSFSLALLLATERLKVIAAVHPGLWQPAVLAKLGATADQLSGGRFAVNVVSGWFKDEFTHLGEPWLEHDERYRRSA EFLQVLRKIWTEDDVDFRGDFYRIHDFTLKPKPVNTPERPNPELFQGGNSTAARRNGGRYADWYFSNGKDFDGITEQIVE VRDHAREVGREVKVGLNGFIIARDTEKEARDTLREIIEKADKPAVEGFRSAVQQAGNSTADKKGMWADSSFEDLVQYNDG FRTQLIGTPEQIAERIAAYRKRGVDLILGGFLHFQEEIEYFGARVLPLVREIEASDASSADAPALATV
Specific function: Catalyzes the desulfonation of aliphatic sulfonates [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SsuD family [H]
Homologues:
Organism=Escherichia coli, GI1787247, Length=361, Percent_Identity=30.1939058171745, Blast_Score=135, Evalue=5e-33, Organism=Escherichia coli, GI1787166, Length=355, Percent_Identity=26.4788732394366, Blast_Score=115, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019911 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.14.14.5 [H]
Molecular weight: Translated: 43617; Mature: 43486
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDGGRGGCCHGSMSTERIADHVKFAYWVPNVSGGLVTSTIEQRTDWNYEYNKKLAQTAE CCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH NNGFEYALSQVRYEASYGAEYQHESTSFSLALLLATERLKVIAAVHPGLWQPAVLAKLGA CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC TADQLSGGRFAVNVVSGWFKDEFTHLGEPWLEHDERYRRSAEFLQVLRKIWTEDDVDFRG CHHHCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DFYRIHDFTLKPKPVNTPERPNPELFQGGNSTAARRNGGRYADWYFSNGKDFDGITEQIV CEEEEEEEEECCCCCCCCCCCCHHHHCCCCCCHHHCCCCCEEEEEECCCCCCCHHHHHHH EVRDHAREVGREVKVGLNGFIIARDTEKEARDTLREIIEKADKPAVEGFRSAVQQAGNST HHHHHHHHHHHHEEECCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC ADKKGMWADSSFEDLVQYNDGFRTQLIGTPEQIAERIAAYRKRGVDLILGGFLHFQEEIE CCCCCCCCCCCHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH YFGARVLPLVREIEASDASSADAPALATV HHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure GDGGRGGCCHGSMSTERIADHVKFAYWVPNVSGGLVTSTIEQRTDWNYEYNKKLAQTAE CCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH NNGFEYALSQVRYEASYGAEYQHESTSFSLALLLATERLKVIAAVHPGLWQPAVLAKLGA CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC TADQLSGGRFAVNVVSGWFKDEFTHLGEPWLEHDERYRRSAEFLQVLRKIWTEDDVDFRG CHHHCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DFYRIHDFTLKPKPVNTPERPNPELFQGGNSTAARRNGGRYADWYFSNGKDFDGITEQIV CEEEEEEEEECCCCCCCCCCCCHHHHCCCCCCHHHCCCCCEEEEEECCCCCCCHHHHHHH EVRDHAREVGREVKVGLNGFIIARDTEKEARDTLREIIEKADKPAVEGFRSAVQQAGNST HHHHHHHHHHHHEEECCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC ADKKGMWADSSFEDLVQYNDGFRTQLIGTPEQIAERIAAYRKRGVDLILGGFLHFQEEIE CCCCCCCCCCCHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH YFGARVLPLVREIEASDASSADAPALATV HHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA