Click here to switch to the map view.

The map label for this gene is 108801286

Identifier: 108801286

GI number: 108801286

Start: 4595063

End: 4595950

Strand: Reverse

Name: 108801286

Synonym: Mmcs_4322

Alternate gene names: NA

Gene position: 4595950-4595063 (Counterclockwise)

Preceding gene: 108801287

Following gene: 108801285

Centisome position: 80.55

GC content: 69.93

Gene sequence:

>888_bases
ATGACCTACTCACCCGGTAGCCCCGGATATCCACCGGCCAATCAGCCCACCACACAGTTCTCGGCACCGACGCAGCATTT
CGGCAAGGTGCCCGAACAGCCCGCCGCCGGCGAGGGCCCCAACAAGCTGCCCGCCTACCTGCTCATGGTGGTCGCAGCCC
TCGGCCTGCTCGTCTACCTCTGCAACTTCGGGCCGATCTTCGAGGTCAGCGCGTCGGACTTCCTCGGCCAGGGTGGCACC
GTCAGCGGTTCGACGCTCGGCATCGGGCTCGCGGTCATCTCGGCGCTCACCGCCGGCCTGCTGGCCGGTGTGACGCTGCT
GTCCAAGGGCCGCACCTACGTCGCCATCGCGGCCGTGCTGTCGGTGCTCGCGTTGCTGCTCGTCATCGCCGAGCTGATCA
ACAAGCCGTCCGAGGCCTCGATCGGCTGGGCGCTCTACGCACTGATCGTGCTGTCGCTGCTGCAGGCCGGATCGGCCGTC
GCCGCACTTCTCTTCGACACCGGTGTCCTGACCCCGCCCACGCCGCGGCCCAAGTACGACCAGCAGCAGCAGTACGGTCA
GTACGGCGGCCCGGGCCCCTACTACGGTCAGCCGCACTCGGGAGCGCACCAGCCTCAGCAGCTTCACACCGGCTCGCACC
AGCAGGCCCCGCAGCAGCAGCGTCCCGGGTACCCGTCGCAGTACGGCGGCGGCTACCCCGGCGCCGGTGGACCGTCGACC
GGCGGCTTCCAGAGCTCGGGACAGCAGAGCGGTCCGCCGACCCCTCCCACCGGATTCCCGACCTACGGTCAGCCCCAGCA
GCAGCAGGGTGGCGGTTCCGGCCAGGGCGGTTCCGGACAGGGACAGCAGCCGCCGACGTCGCAGCAGTCCGGCCAGAACC
CCTCGTAA

Upstream 100 bases:

>100_bases
AGCGTGGGTGCGCTAGCGTGGGAGAGCGAATTGCTCAGGTGGTCCGTGTTCATGCGCACGTGTTGCCCACGTCAGACGCC
CGATCAGCACAGGAGAGGTC

Downstream 100 bases:

>100_bases
AACCGCCCGCGCGTGCGTGAACACCGCGCACGCCAGCCTGTGCGAGGGGCCCAGTTAGTGGACAACCGGCCGGTCGGCAC
CCGCCAGGCCCGCGAGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTYSPGSPGYPPANQPTTQFSAPTQHFGKVPEQPAAGEGPNKLPAYLLMVVAALGLLVYLCNFGPIFEVSASDFLGQGGT
VSGSTLGIGLAVISALTAGLLAGVTLLSKGRTYVAIAAVLSVLALLLVIAELINKPSEASIGWALYALIVLSLLQAGSAV
AALLFDTGVLTPPTPRPKYDQQQQYGQYGGPGPYYGQPHSGAHQPQQLHTGSHQQAPQQQRPGYPSQYGGGYPGAGGPST
GGFQSSGQQSGPPTPPTGFPTYGQPQQQQGGGSGQGGSGQGQQPPTSQQSGQNPS

Sequences:

>Translated_295_residues
MTYSPGSPGYPPANQPTTQFSAPTQHFGKVPEQPAAGEGPNKLPAYLLMVVAALGLLVYLCNFGPIFEVSASDFLGQGGT
VSGSTLGIGLAVISALTAGLLAGVTLLSKGRTYVAIAAVLSVLALLLVIAELINKPSEASIGWALYALIVLSLLQAGSAV
AALLFDTGVLTPPTPRPKYDQQQQYGQYGGPGPYYGQPHSGAHQPQQLHTGSHQQAPQQQRPGYPSQYGGGYPGAGGPST
GGFQSSGQQSGPPTPPTGFPTYGQPQQQQGGGSGQGGSGQGQQPPTSQQSGQNPS
>Mature_294_residues
TYSPGSPGYPPANQPTTQFSAPTQHFGKVPEQPAAGEGPNKLPAYLLMVVAALGLLVYLCNFGPIFEVSASDFLGQGGTV
SGSTLGIGLAVISALTAGLLAGVTLLSKGRTYVAIAAVLSVLALLLVIAELINKPSEASIGWALYALIVLSLLQAGSAVA
ALLFDTGVLTPPTPRPKYDQQQQYGQYGGPGPYYGQPHSGAHQPQQLHTGSHQQAPQQQRPGYPSQYGGGYPGAGGPSTG
GFQSSGQQSGPPTPPTGFPTYGQPQQQQGGGSGQGGSGQGQQPPTSQQSGQNPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.paratuberculosis 34 kDa antigenic protein [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29995; Mature: 29864

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYSPGSPGYPPANQPTTQFSAPTQHFGKVPEQPAAGEGPNKLPAYLLMVVAALGLLVYL
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
CNFGPIFEVSASDFLGQGGTVSGSTLGIGLAVISALTAGLLAGVTLLSKGRTYVAIAAVL
HCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SVLALLLVIAELINKPSEASIGWALYALIVLSLLQAGSAVAALLFDTGVLTPPTPRPKYD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QQQQYGQYGGPGPYYGQPHSGAHQPQQLHTGSHQQAPQQQRPGYPSQYGGGYPGAGGPST
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHCCCHHHCCCCCCCCCCCCCCCCCCCC
GGFQSSGQQSGPPTPPTGFPTYGQPQQQQGGGSGQGGSGQGQQPPTSQQSGQNPS
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TYSPGSPGYPPANQPTTQFSAPTQHFGKVPEQPAAGEGPNKLPAYLLMVVAALGLLVYL
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
CNFGPIFEVSASDFLGQGGTVSGSTLGIGLAVISALTAGLLAGVTLLSKGRTYVAIAAVL
HCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SVLALLLVIAELINKPSEASIGWALYALIVLSLLQAGSAVAALLFDTGVLTPPTPRPKYD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QQQQYGQYGGPGPYYGQPHSGAHQPQQLHTGSHQQAPQQQRPGYPSQYGGGYPGAGGPST
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHCCCHHHCCCCCCCCCCCCCCCCCCCC
GGFQSSGQQSGPPTPPTGFPTYGQPQQQQGGGSGQGGSGQGQQPPTSQQSGQNPS
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]