Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

Click here to switch to the map view.

The map label for this gene is rpmF [H]

Identifier: 108801266

GI number: 108801266

Start: 4569564

End: 4569737

Strand: Reverse

Name: rpmF [H]

Synonym: Mmcs_4302

Alternate gene names: 108801266

Gene position: 4569737-4569564 (Counterclockwise)

Preceding gene: 108801267

Following gene: 108801265

Centisome position: 80.09

GC content: 66.09

Gene sequence:

>174_bases
ATGGCTGTGCCCAAGCGCAGAATGTCGCGTTCGAACACTCGTAGCCGTCGCGCGCAGTGGAAGGCCAAGCCCACCGAACT
CGTCGGTGTGACCGTCGCCGGCCAGCAGCACAAGGTGCCTCGTCGCCTGCTCAAGGCCGCCCGTCTGGGGCTCATCGACC
TCGATCGTCGCTAG

Upstream 100 bases:

>100_bases
GCTGCGCAGCTCACCGGCTATCCTGAAGAGCACTTGCCGGCGCCCCGCCCTTGATCGGGTTTCGCGTGGCACCCGTACCC
GTCAGAGGAGAAGCTCGATC

Downstream 100 bases:

>100_bases
ACGACTTCGGGACGTCAGCGGCGCGCCTCTCAGCGCTCTCTCAGCCGTTGAGGTGAAACTGTGCCTGTGCGCATACTTGT
CGTCGACGACGATCGCGCGG

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MAVPKRRMSRSNTRSRRAQWKAKPTELVGVTVAGQQHKVPRRLLKAARLGLIDLDRR

Sequences:

>Translated_57_residues
MAVPKRRMSRSNTRSRRAQWKAKPTELVGVTVAGQQHKVPRRLLKAARLGLIDLDRR
>Mature_56_residues
AVPKRRMSRSNTRSRRAQWKAKPTELVGVTVAGQQHKVPRRLLKAARLGLIDLDRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002677 [H]

Pfam domain/function: PF01783 Ribosomal_L32p [H]

EC number: NA

Molecular weight: Translated: 6562; Mature: 6431

Theoretical pI: Translated: 12.75; Mature: 12.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKRRMSRSNTRSRRAQWKAKPTELVGVTVAGQQHKVPRRLLKAARLGLIDLDRR
CCCCCCHHHCCCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEECCCC
>Mature Secondary Structure 
AVPKRRMSRSNTRSRRAQWKAKPTELVGVTVAGQQHKVPRRLLKAARLGLIDLDRR
CCCCCHHHCCCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA