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The map label for this gene is sodC [H]

Identifier: 108801159

GI number: 108801159

Start: 4457796

End: 4458455

Strand: Reverse

Name: sodC [H]

Synonym: Mmcs_4195

Alternate gene names: 108801159

Gene position: 4458455-4457796 (Counterclockwise)

Preceding gene: 108801163

Following gene: 108801153

Centisome position: 78.14

GC content: 70.45

Gene sequence:

>660_bases
ATGACGACACAACTCAAGACCGTCGACGGGAAGGCGGTCGCCGATGCCACCATCGACTTCACCGGCGGATACGCCACCGT
GACCGTCGAAACCGTCGGCGACGGCACGCTCTCTCCGGGCTTCCACGGGTTGCACATCCACGAATTCGGCCGCTGTGAGC
CGAACTCGCCCGCCCCCAACGGCGGACCGACGGGCGACTTCGCCTCGTCCGGAGAGCACTTCCAGGCCGAGGGGAACACC
GGTATGCCGGCCAGCGGCGATCTGCCGCCCCTGCTGGTCCGTTCCGACGGAGCCGGCAAGCTCGTCGTCACCACCGACGC
GTTCACCGAGGACCAACTGAAGGGTCCCGACGGATCGTCGATCCTCCTGCACCAGGGCGCCGACATGCCGGGTGCGACCG
AAGGGGTCGACACCCGCATCGCCTGCGGTGTGATCAGCCCGGCCAGCGCCGAGACGTCCGTGTCGACGTCGACCTCCACG
TCGACGGTCACCACCACGGTGGCGCCCGTCCCGCCCGCCACCGTCACCGAGACGACGACGCCGCCGACCACCAGCCCCAG
CCCGACCACCACGGCAACCACCACGGTCTCCGAGACCACGCCGCCGACGACGACCACCGTGCCCACCAGCCCGGAGAGCC
CGACTCCGCCGGCGGGCTGA

Upstream 100 bases:

>100_bases
TTTGCTCGCCGCGCCCGCCGCCGTCCTGAGCGGCTGTTCCAACGAATCCGGGGATAGCGAAGCCACCTCAACGACATCCG
GAGCAGCCAGTCCGCAGGTC

Downstream 100 bases:

>100_bases
TCGGGTTCGGCCGCGCCTCAGAGCATGGCGGTGAGGAACGACACGACCGCGAGCACCACCAGGATCAGTCCGACCATCAC
CAGGAACGCGCCCATCGAGG

Product: copper/zinc binding superoxide dismutase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTTQLKTVDGKAVADATIDFTGGYATVTVETVGDGTLSPGFHGLHIHEFGRCEPNSPAPNGGPTGDFASSGEHFQAEGNT
GMPASGDLPPLLVRSDGAGKLVVTTDAFTEDQLKGPDGSSILLHQGADMPGATEGVDTRIACGVISPASAETSVSTSTST
STVTTTVAPVPPATVTETTTPPTTSPSPTTTATTTVSETTPPTTTTVPTSPESPTPPAG

Sequences:

>Translated_219_residues
MTTQLKTVDGKAVADATIDFTGGYATVTVETVGDGTLSPGFHGLHIHEFGRCEPNSPAPNGGPTGDFASSGEHFQAEGNT
GMPASGDLPPLLVRSDGAGKLVVTTDAFTEDQLKGPDGSSILLHQGADMPGATEGVDTRIACGVISPASAETSVSTSTST
STVTTTVAPVPPATVTETTTPPTTSPSPTTTATTTVSETTPPTTTTVPTSPESPTPPAG
>Mature_218_residues
TTQLKTVDGKAVADATIDFTGGYATVTVETVGDGTLSPGFHGLHIHEFGRCEPNSPAPNGGPTGDFASSGEHFQAEGNTG
MPASGDLPPLLVRSDGAGKLVVTTDAFTEDQLKGPDGSSILLHQGADMPGATEGVDTRIACGVISPASAETSVSTSTSTS
TVTTTVAPVPPATVTETTTPPTTSPSPTTTATTTVSETTPPTTTTVPTSPESPTPPAG

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems. May play a role in favoring mycobacterial survival in phagocytes [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 21809; Mature: 21678

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQLKTVDGKAVADATIDFTGGYATVTVETVGDGTLSPGFHGLHIHEFGRCEPNSPAPN
CCCEEEECCCCEEEEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCC
GGPTGDFASSGEHFQAEGNTGMPASGDLPPLLVRSDGAGKLVVTTDAFTEDQLKGPDGSS
CCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCHHCCCCCCCE
ILLHQGADMPGATEGVDTRIACGVISPASAETSVSTSTSTSTVTTTVAPVPPATVTETTT
EEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCEEEEEECCCCCCCEECCCC
PPTTSPSPTTTATTTVSETTPPTTTTVPTSPESPTPPAG
CCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCC
>Mature Secondary Structure 
TTQLKTVDGKAVADATIDFTGGYATVTVETVGDGTLSPGFHGLHIHEFGRCEPNSPAPN
CCEEEECCCCEEEEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCC
GGPTGDFASSGEHFQAEGNTGMPASGDLPPLLVRSDGAGKLVVTTDAFTEDQLKGPDGSS
CCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCHHCCCCCCCE
ILLHQGADMPGATEGVDTRIACGVISPASAETSVSTSTSTSTVTTTVAPVPPATVTETTT
EEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCEEEEEECCCCCCCEECCCC
PPTTSPSPTTTATTTVSETTPPTTTTVPTSPESPTPPAG
CCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11549243 [H]