| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is acg [H]
Identifier: 108801092
GI number: 108801092
Start: 4394153
End: 4395130
Strand: Reverse
Name: acg [H]
Synonym: Mmcs_4128
Alternate gene names: 108801092
Gene position: 4395130-4394153 (Counterclockwise)
Preceding gene: 108801093
Following gene: 108801091
Centisome position: 77.03
GC content: 70.45
Gene sequence:
>978_bases ATGTCGGACACCATGGTCGATAGCGAGGTCATCCGGGGCGCTGTCCAATTGGCTTGCCGTGCGCCGTCATTGCACAACAG CCAACCCTGGCGCTGGGTCGTCGACACCGACGGGCTGCAGCTGTTCCTCGACCCCGCGCGGCTGATGTTCTCGGCGGACA GCTCCGGCCGCGAGGCCGTGATCAGTTGCGGCGCGGTACTTCACCATCTTCGGGTCGCGTTGGCGGCCGCGGGATTTGCC GCCCACGTCGACCGGCTGCCGGACCCGAATCACCGCGACCACCTGGCGACGGTCACCGTGACGTCGATGGACTTCGTCAC CGAGGCCCACCGGCGGCGTGCCGACGCGATCCTGTTGCGCCGCACCGACCGTCTCCCGATGGCGGCCGCGCCGGCCTGGG AGTCCTTCGAACAGTGGATGCGCACCCGCCTGGAGGCCGACGTCCAACTCGACGTGCTGGCCGACCACGCCCGCCCCCGG CTCGCCGAGACCTCCCACATGACCGAGGCCCTGCGCCTCTACGACTCGTCGTACCACGCCGAACTCAGTTGGTGGACGGC GCCGTTCGAGATCAGCGCGGGTATCCCGCAGAGTGCGCTGGTGTCCGCCGAAGAGAGCGAACGGGTCGACCTCGGCCGGA GCTTCCCCGTCACCCGGGGCGCGGAGCGGCGCGCGGCCATCGACGAGGACCGCGCCACCATCGTCGTGCTGTCCACCGAT GGCGACGACCGCCTCGACGCGCTGCGCAGCGGTGAGGCGATGTCCGCGGTGCTGCTCGAGGCCACCATGGCCGGGCTGGC CACCTGCACCGTCACCCACGTCACCGAACTGGAGTCCAGTCGCGCGCTCGTCGGCGGATTGCTCGAGCGGGAGGCGCGGC CGCAGGTACTGATACGCATCGGGCTGGCACCCGCGATCGAACAGGTGCCCCCGCCCACGCCACGCAGGGCGCTCGAGGAG GTCCTGCAGTTCGGTTAG
Upstream 100 bases:
>100_bases GATTTCGGCGTGGTTGGTCGCGCCCAGCGCGACCGACCACGCCGAAATCACAGGACCTAAGGCCCTAGGCAGTTGCTTCG GTGTCGGCCATGCTGGAGTC
Downstream 100 bases:
>100_bases GAGGCCGCCATGACAGAGCGTCACCCGGTGGTCGTCGGCATCGACGGATCCCGGGCCGCACTGGACGCGGCGCTGTGGGC GGTCGACGCGGCGGTCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSDTMVDSEVIRGAVQLACRAPSLHNSQPWRWVVDTDGLQLFLDPARLMFSADSSGREAVISCGAVLHHLRVALAAAGFA AHVDRLPDPNHRDHLATVTVTSMDFVTEAHRRRADAILLRRTDRLPMAAAPAWESFEQWMRTRLEADVQLDVLADHARPR LAETSHMTEALRLYDSSYHAELSWWTAPFEISAGIPQSALVSAEESERVDLGRSFPVTRGAERRAAIDEDRATIVVLSTD GDDRLDALRSGEAMSAVLLEATMAGLATCTVTHVTELESSRALVGGLLEREARPQVLIRIGLAPAIEQVPPPTPRRALEE VLQFG
Sequences:
>Translated_325_residues MSDTMVDSEVIRGAVQLACRAPSLHNSQPWRWVVDTDGLQLFLDPARLMFSADSSGREAVISCGAVLHHLRVALAAAGFA AHVDRLPDPNHRDHLATVTVTSMDFVTEAHRRRADAILLRRTDRLPMAAAPAWESFEQWMRTRLEADVQLDVLADHARPR LAETSHMTEALRLYDSSYHAELSWWTAPFEISAGIPQSALVSAEESERVDLGRSFPVTRGAERRAAIDEDRATIVVLSTD GDDRLDALRSGEAMSAVLLEATMAGLATCTVTHVTELESSRALVGGLLEREARPQVLIRIGLAPAIEQVPPPTPRRALEE VLQFG >Mature_324_residues SDTMVDSEVIRGAVQLACRAPSLHNSQPWRWVVDTDGLQLFLDPARLMFSADSSGREAVISCGAVLHHLRVALAAAGFAA HVDRLPDPNHRDHLATVTVTSMDFVTEAHRRRADAILLRRTDRLPMAAAPAWESFEQWMRTRLEADVQLDVLADHARPRL AETSHMTEALRLYDSSYHAELSWWTAPFEISAGIPQSALVSAEESERVDLGRSFPVTRGAERRAAIDEDRATIVVLSTDG DDRLDALRSGEAMSAVLLEATMAGLATCTVTHVTELESSRALVGGLLEREARPQVLIRIGLAPAIEQVPPPTPRRALEEV LQFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: NA
Molecular weight: Translated: 35704; Mature: 35573
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTMVDSEVIRGAVQLACRAPSLHNSQPWRWVVDTDGLQLFLDPARLMFSADSSGREAV CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECHHHHEEECCCCCCHHH ISCGAVLHHLRVALAAAGFAAHVDRLPDPNHRDHLATVTVTSMDFVTEAHRRRADAILLR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHEEE RTDRLPMAAAPAWESFEQWMRTRLEADVQLDVLADHARPRLAETSHMTEALRLYDSSYHA ECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHCCCCCE ELSWWTAPFEISAGIPQSALVSAEESERVDLGRSFPVTRGAERRAAIDEDRATIVVLSTD EEEEEECCEEEECCCCHHHHCCCCCCCHHCCCCCCCCCCCCCHHHCCCCCCEEEEEEECC GDDRLDALRSGEAMSAVLLEATMAGLATCTVTHVTELESSRALVGGLLEREARPQVLIRI CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE GLAPAIEQVPPPTPRRALEEVLQFG CCCHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure SDTMVDSEVIRGAVQLACRAPSLHNSQPWRWVVDTDGLQLFLDPARLMFSADSSGREAV CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECHHHHEEECCCCCCHHH ISCGAVLHHLRVALAAAGFAAHVDRLPDPNHRDHLATVTVTSMDFVTEAHRRRADAILLR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHEEE RTDRLPMAAAPAWESFEQWMRTRLEADVQLDVLADHARPRLAETSHMTEALRLYDSSYHA ECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHCCCCCE ELSWWTAPFEISAGIPQSALVSAEESERVDLGRSFPVTRGAERRAAIDEDRATIVVLSTD EEEEEECCEEEECCCCHHHHCCCCCCCHHCCCCCCCCCCCCCHHHCCCCCCEEEEEEECC GDDRLDALRSGEAMSAVLLEATMAGLATCTVTHVTELESSRALVGGLLEREARPQVLIRI CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE GLAPAIEQVPPPTPRRALEEVLQFG CCCHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]