| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is ylaK [H]
Identifier: 108801093
GI number: 108801093
Start: 4395237
End: 4396607
Strand: Reverse
Name: ylaK [H]
Synonym: Mmcs_4129
Alternate gene names: 108801093
Gene position: 4396607-4395237 (Counterclockwise)
Preceding gene: 108801094
Following gene: 108801092
Centisome position: 77.06
GC content: 68.56
Gene sequence:
>1371_bases GTGCCGCAGTGTCCGCCGACAGGTTCGCGGGGGACCCGCGGATACCAGGAGCGCTACGTGACCGATTCGCCTCTCCGGAC CTACGTGCTCGACACCTCCGTATTGCTGTCCGATCCCTGGGCAACAACGCGGTTCGCCGAGCACGAGGTGGTCGTCCCGC TGGTGGTCATCAGTGAATTGGAAGCCAAACGGCACCACCACGAGTTGGGCTGGTTCGCCCGGCAGGCGTTGCGCCTGTTC GACGACCTCCGCCTCGAACACGGTCGCCTCGATCAGCCGATACCCGTTGGCTCCGAAGGCGGGACGCTGCACGTCGAGCT GAACCACAGCGACCCGTCGGTGCTGCCCGCCGGCTTCCGTAACGACAGTAATGACGCCCGGATCCTCACCGTCGCAGCGA ATCTCGCCGCCGAGGGGAAATGCGTCACGCTGGTCAGCAAGGACATCCCGCTGCGCGTCAAGGCCGGTGCCGTCGGGCTG ACCGCCGACGAGTACCACGCCCAGGACGTCGTGGTGTCCGGCTGGACCGGCATGGACGAGATCGACGTGACCACCGACGA GGTCGACGCGCTGTTCGCCGACGGTGAGATCGATCTGGCCGCGGCGCGGGATCTGCCGTGCCACACCGGCGTTCGGCTGT TGGGCGGTAGCTCGCACGCACTCGGGCGGGTCAACGCCGCCAAGCGCGTGCAGTTGGTGCGGGGTGATCGCGAAGTGTTC GGCCTCCGGGGAAGGTCCGCCGAACAACGCGTCGCCCTCGACCTGCTGCAGGACGAATCGGTGGGCATCGTCTCACTCGG CGGTAAGGCGGGCACCGGTAAATCGGCGCTGGCGCTGTGCGCGGGCCTCGAGGCGGTGCTCGAGCGGCGCACCCAGCGCA AGGTGGTGGTGTTCCGCCCGCTCTATGCCGTCGGCGGACAGGATCTGGGCTACCTGCCGGGCAGCGAGAGCGACAAGATG GGTCCGTGGGCGCAAGCCGTCTTCGACACCCTCGAAGGGCTGGCCAGCCCCGCGGTGCTCGAAGAGGTGCTCGCGCGCGG AATGCTCGAAGTGTTGCCGCTCACCCACATTCGCGGTCGCTCGCTGCACGATTCGTTCGTGATCGTCGACGAGGCGCAGT CGCTGGAGCGCAACGTCCTGTTGACGGTGCTGTCGCGCCTGGGGGCCGGCTCGCGCGTGGTGCTCACCCACGACGTCGCC CAGCGCGACAACCTGCGGGTCGGGCGTCACGACGGCGTGGCGGCGGTGATCGAGAAGCTCAAGGGCCACCCGCTGTTCGC CCACATCACCCTGCAGCGCAGCGAACGCTCGCCGATCGCCGCGCTGGTCACCGAGATGCTCGAGGAGATCAGCCCCGGCG CGCTGCCGTGA
Upstream 100 bases:
>100_bases CTGCGACGGGAGTAGCGTCGGCTCCGATGGCTAGCGAATTGCTCTGCTGTCCGGGCGGTACCCGATCGTTGCGATCACGA GAGGGCCGGCCCCGGCCCTG
Downstream 100 bases:
>100_bases CGTGGTGATTTCGGCGTGGTTGGTCGCGCCCAGCGCGACCGACCACGCCGAAATCACAGGACCTAAGGCCCTAGGCAGTT GCTTCGGTGTCGGCCATGCT
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MPQCPPTGSRGTRGYQERYVTDSPLRTYVLDTSVLLSDPWATTRFAEHEVVVPLVVISELEAKRHHHELGWFARQALRLF DDLRLEHGRLDQPIPVGSEGGTLHVELNHSDPSVLPAGFRNDSNDARILTVAANLAAEGKCVTLVSKDIPLRVKAGAVGL TADEYHAQDVVVSGWTGMDEIDVTTDEVDALFADGEIDLAAARDLPCHTGVRLLGGSSHALGRVNAAKRVQLVRGDREVF GLRGRSAEQRVALDLLQDESVGIVSLGGKAGTGKSALALCAGLEAVLERRTQRKVVVFRPLYAVGGQDLGYLPGSESDKM GPWAQAVFDTLEGLASPAVLEEVLARGMLEVLPLTHIRGRSLHDSFVIVDEAQSLERNVLLTVLSRLGAGSRVVLTHDVA QRDNLRVGRHDGVAAVIEKLKGHPLFAHITLQRSERSPIAALVTEMLEEISPGALP
Sequences:
>Translated_456_residues MPQCPPTGSRGTRGYQERYVTDSPLRTYVLDTSVLLSDPWATTRFAEHEVVVPLVVISELEAKRHHHELGWFARQALRLF DDLRLEHGRLDQPIPVGSEGGTLHVELNHSDPSVLPAGFRNDSNDARILTVAANLAAEGKCVTLVSKDIPLRVKAGAVGL TADEYHAQDVVVSGWTGMDEIDVTTDEVDALFADGEIDLAAARDLPCHTGVRLLGGSSHALGRVNAAKRVQLVRGDREVF GLRGRSAEQRVALDLLQDESVGIVSLGGKAGTGKSALALCAGLEAVLERRTQRKVVVFRPLYAVGGQDLGYLPGSESDKM GPWAQAVFDTLEGLASPAVLEEVLARGMLEVLPLTHIRGRSLHDSFVIVDEAQSLERNVLLTVLSRLGAGSRVVLTHDVA QRDNLRVGRHDGVAAVIEKLKGHPLFAHITLQRSERSPIAALVTEMLEEISPGALP >Mature_455_residues PQCPPTGSRGTRGYQERYVTDSPLRTYVLDTSVLLSDPWATTRFAEHEVVVPLVVISELEAKRHHHELGWFARQALRLFD DLRLEHGRLDQPIPVGSEGGTLHVELNHSDPSVLPAGFRNDSNDARILTVAANLAAEGKCVTLVSKDIPLRVKAGAVGLT ADEYHAQDVVVSGWTGMDEIDVTTDEVDALFADGEIDLAAARDLPCHTGVRLLGGSSHALGRVNAAKRVQLVRGDREVFG LRGRSAEQRVALDLLQDESVGIVSLGGKAGTGKSALALCAGLEAVLERRTQRKVVVFRPLYAVGGQDLGYLPGSESDKMG PWAQAVFDTLEGLASPAVLEEVLARGMLEVLPLTHIRGRSLHDSFVIVDEAQSLERNVLLTVLSRLGAGSRVVLTHDVAQ RDNLRVGRHDGVAAVIEKLKGHPLFAHITLQRSERSPIAALVTEMLEEISPGALP
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=192, Percent_Identity=32.8125, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1787257, Length=165, Percent_Identity=29.6969696969697, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 49230; Mature: 49098
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQCPPTGSRGTRGYQERYVTDSPLRTYVLDTSVLLSDPWATTRFAEHEVVVPLVVISEL CCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECEEEECCCCCCCEECCCCEEEHHHHHHHH EAKRHHHELGWFARQALRLFDDLRLEHGRLDQPIPVGSEGGTLHVELNHSDPSVLPAGFR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC NDSNDARILTVAANLAAEGKCVTLVSKDIPLRVKAGAVGLTADEYHAQDVVVSGWTGMDE CCCCCCEEEEEEECCCCCCCEEEEEECCCCEEEECCEEECCCCCCCCCEEEEECCCCCCC IDVTTDEVDALFADGEIDLAAARDLPCHTGVRLLGGSSHALGRVNAAKRVQLVRGDREVF CCCCHHHHHEEEECCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHEEECCHHHE GLRGRSAEQRVALDLLQDESVGIVSLGGKAGTGKSALALCAGLEAVLERRTQRKVVVFRP ECCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC LYAVGGQDLGYLPGSESDKMGPWAQAVFDTLEGLASPAVLEEVLARGMLEVLPLTHIRGR HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHCCCC SLHDSFVIVDEAQSLERNVLLTVLSRLGAGSRVVLTHDVAQRDNLRVGRHDGVAAVIEKL CCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHH KGHPLFAHITLQRSERSPIAALVTEMLEEISPGALP CCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PQCPPTGSRGTRGYQERYVTDSPLRTYVLDTSVLLSDPWATTRFAEHEVVVPLVVISEL CCCCCCCCCCCCCHHHCCCCCCCCEEEEEECEEEECCCCCCCEECCCCEEEHHHHHHHH EAKRHHHELGWFARQALRLFDDLRLEHGRLDQPIPVGSEGGTLHVELNHSDPSVLPAGFR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC NDSNDARILTVAANLAAEGKCVTLVSKDIPLRVKAGAVGLTADEYHAQDVVVSGWTGMDE CCCCCCEEEEEEECCCCCCCEEEEEECCCCEEEECCEEECCCCCCCCCEEEEECCCCCCC IDVTTDEVDALFADGEIDLAAARDLPCHTGVRLLGGSSHALGRVNAAKRVQLVRGDREVF CCCCHHHHHEEEECCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHEEECCHHHE GLRGRSAEQRVALDLLQDESVGIVSLGGKAGTGKSALALCAGLEAVLERRTQRKVVVFRP ECCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC LYAVGGQDLGYLPGSESDKMGPWAQAVFDTLEGLASPAVLEEVLARGMLEVLPLTHIRGR HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHCCCC SLHDSFVIVDEAQSLERNVLLTVLSRLGAGSRVVLTHDVAQRDNLRVGRHDGVAAVIEKL CCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHH KGHPLFAHITLQRSERSPIAALVTEMLEEISPGALP CCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]